Bipolaris zeicola: COCCADRAFT_88979
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Entry
COCCADRAFT_88979 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bze03016
]
COCCADRAFT_88979
Enzymes [BR:
bze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COCCADRAFT_88979
Transfer RNA biogenesis [BR:
bze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCCADRAFT_88979
Prokaryotic type
COCCADRAFT_88979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5543
Motif
Other DBs
NCBI-GeneID:
19152684
NCBI-ProteinID:
XP_007709557
JGI:
88979
UniProt:
W6YKE7
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MDSEGEKVLEGIFAVAKPANVSSADVLLKLQETFAPSATFAPLLRTQPKRTSKSSDQVFR
LGHGGTLDPLAAGVLIVGIGRGTKHLSNYLSCNKTYETVVLFGASTDTYDCTGSITQEAD
YLHVTKELVDGKLGTFRGTIQQLPPLYSALKINGIKACEYARQGKDLPRDLESREMHVDE
CTLLEWYEPGQHDFAWPSKVEPASAPAAKIRLTVCSGFYVRSFAHDLGRACNTCSHMASL
LRTQQADFTTSNPPEPSSLTSALTYADLEAGEHVWGPKLRPQLDRWVTAHPVVQGHVNGR
DASVKRKTEEQQARPRQRFRGEWVASTKKERIKQQGGKFKGKWGRKLAADREANNTSDQP
VVPVINDQKL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagggtgagaaagtcctcgagggtatcttcgctgttgccaagccagcaaac
gtctcctctgcagatgttctcctcaaattgcaagaaacttttgcgccatcagccacattt
gcgccactgctcaggacgcaacccaagcgtaccagcaaatcgtctgatcaggtgtttcgc
ctcggacacggcgggactctggatcccttggctgctggagttcttattgtgggcatcggc
cgtggcaccaaacacctctctaattatctgtcttgcaacaagacttatgagacagttgtg
cttttcggcgcaagcacggatacttacgactgtactggctccataactcaggaagcggac
tacttacacgtgacaaaagagttggttgatggaaagcttgggactttcagaggaacgata
caacaactgccccctctgtactcggcattgaagatcaatggtatcaaagcctgcgagtac
gcgcgtcaggggaaggacttgccacgagatctggagagccgagaaatgcatgttgatgag
tgtacgctgctggaatggtacgagccgggacagcatgactttgcatggcccagcaaggtc
gagcccgcttcagcacccgccgcaaaaattcgactgacggtatgctcgggcttttacgtt
cgcagctttgcacatgatctcggcagggcgtgtaatacgtgttcacacatggcatctttg
cttcgaacacaacaagcagatttcaccacatcgaacccacctgagccatcgagtttgaca
agcgcgctaacatatgcggatctggaagctggcgaacacgtctgggggccgaagcttaga
ccacaacttgatcgttgggtcactgcccatccggtcgttcaagggcatgtcaatgggagg
gatgcaagtgtgaagcgcaagaccgaagagcagcaagcaagaccgaggcaacggttccgt
ggagagtgggttgcaagcacaaagaaagaaaggatcaaacagcaaggaggcaagttcaag
ggcaaatggggaagaaagcttgcggccgacagggaggcaaataacaccagtgaccagccg
gtggtgcctgtgatcaacgatcaaaagctatga
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