KEGG   Bipolaris zeicola: COCCADRAFT_89050
Entry
COCCADRAFT_89050  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
bze  Bipolaris zeicola
Pathway
bze03013  Nucleocytoplasmic transport
bze03015  mRNA surveillance pathway
bze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCCADRAFT_89050
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCCADRAFT_89050
   03015 mRNA surveillance pathway
    COCCADRAFT_89050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_89050
   03041 Spliceosome [BR:bze03041]
    COCCADRAFT_89050
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     COCCADRAFT_89050
Spliceosome [BR:bze03041]
 Complex C
  Other components
   EJC/TREX
    COCCADRAFT_89050
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 19152700
NCBI-ProteinID: XP_007709661
JGI: 89050
UniProt: W6YEK7
LinkDB
Position
Unknown
AA seq 158 aa
MEEDAKMDIDQPEQQDVPAADPKASDAQTAAGATAVRSIEGWIIIVTNVHEEATEEDLQD
MFGEFGTVKNLHMNLDRRTGYVKGYALIEYATLDEAKAAIKGANGEELLEQKVTVDYAFV
RPPPASKGRARDHDRRQSGRGAARARSRSPGRDDMDDE
NT seq 477 nt   +upstreamnt  +downstreamnt
atggaagaagacgccaaaatggacatcgatcagccagagcagcaagacgtgccggctgcc
gaccccaaggccagcgacgcgcagacagcagcgggcgcaacagctgtgcgctccatcgag
ggctggatcatcattgtcaccaatgtccacgaggaggcgactgaggaggatctccaggac
atgtttggcgaatttggcactgttaagaacttgcacatgaacctcgaccgtcgcacgggt
tatgtcaagggctacgcactgatcgaatacgccacattggacgaagcaaaggcggccata
aagggggccaacggcgaggagcttctcgagcaaaaggtcaccgtcgactatgcttttgta
cgaccaccaccagccagcaagggccgtgcgcgcgaccatgacaggagacagagcgggcgt
ggtgcggcgagggcaaggagcaggagtccgggtcgcgacgacatggacgacgagtag

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