Bipolaris zeicola: COCCADRAFT_8981
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Entry
COCCADRAFT_8981 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
bze
Bipolaris zeicola
Pathway
bze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCADRAFT_8981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_8981
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
COCCADRAFT_8981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
19152850
NCBI-ProteinID:
XP_007717008
JGI:
8981
UniProt:
W6XSR3
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MGASKQYLTLHTVESAHPKASDIFAVAPTSTQLLSASGASSISVYDTTKPDFPVIQTLDK
AHPLGIHHLVTAREEKARRAASAGFEGKVKIWSQSEDGVWSEDGEIVDQNKPGEVWAIAM
SADGQYLASSSINGKINVWSLNKDEDMPRIREYETKGSFGLCVDLSRDGSFTASGHENGS
IYVFNNDTGRLAHSLAGLVHPIRSVAFSPTSKLLAAGGDARIIAIYNVSSGEQVANLTGH
GGWVLSLDWSDTGEYLLSGSHDSKAKVWRFETKTCVATHSHGDKPLWSAKWLPKVPTKSE
MFALAGGNNTIGIYREAAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtcgaaacaataccttaccctccacacggtcgagtcggcccatcccaaagcg
agcgacatcttcgctgtagcgccgactagtacacagttactctcagcttctggtgcgagc
agcatcagtgtttacgacaccacaaaacccgactttccagttatacaaacacttgacaag
gcacacccgctcggcatacaccacctggtgactgcgcgcgaagagaaggcacgacgggct
gcgagtgctggtttcgagggcaaggtcaaaatatggagccagagtgaagacggagtgtgg
agtgaggatggagagattgttgatcagaacaaaccgggtgaggtatgggcgattgcaatg
agcgcagatgggcagtaccttgctagcagtagtatcaacggcaagataaatgtctggagc
ttgaacaaagacgaggatatgccccgcatacgcgagtatgagaccaaaggcagctttggt
ttgtgcgtagacctgagccgtgacggcagcttcacagcctcgggacatgagaatggctcg
atatacgttttcaataacgacactgggcgtcttgcgcactctctagcaggcctcgtacac
ccaattcgcagtgtggccttctccccaacttcaaagctcctagcagcaggaggcgatgcc
agaatcatcgcaatttataatgtctcttcgggtgagcaggtagcgaacctcacaggccat
ggtggctgggtactcagtctcgactggagcgacaccggcgagtatctgctgtcaggatct
cacgactcaaaagcaaaggtatggcggtttgagactaagacgtgcgtcgcaactcactcc
cacggcgacaagcctctttggagtgcgaagtggttacccaaggttcctacaaagagcgag
atgtttgcactggcgggaggaaacaacaccattggaatataccgagaggctgctggctga
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integrated database retrieval system