Bipolaris zeicola: COCCADRAFT_8984
Help
Entry
COCCADRAFT_8984 CDS
T03110
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bze
Bipolaris zeicola
Pathway
bze00040
Pentose and glucuronate interconversions
bze01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCCADRAFT_8984
Enzymes [BR:
bze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCCADRAFT_8984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
19152857
NCBI-ProteinID:
XP_007717014
JGI:
8984
UniProt:
W6Y128
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MKLSALSLLSFALSATAAPTGSDFSLVGFAKDNPIGPTTGGQTKEGKSVTVETLADFVKA
VTSTEPLVVYAKGNFNLTSRVQVQSNKSLIGLGKGAQITSHGLNIYNKTNVIIRNFGFTA
TADDAMTIRNSTRIWIDHNEFTTGNFPALGPDAFDGQVDIIRTSDWITVSWNYFHDHWKS
SLVGNSDALRDIDQGHLHVTYHHNYWRHEGTRGPAGRFGHQHVYNNLFVDFLYQAIHSRS
DNQVLVEGNVFKGNTREALSTYGLVIPDDSPNTSPDGDFEIDGFANLGAKNDFGKAGVNI
TQVGNFTQAPYKYKLTPLNKVEGVVKKGAGLGKI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtcggccctttccctcctttctttcgctctatctgcaaccgcagcacctaca
ggctccgattttagcctggtcgggttcgccaaagataatccaatcggcccaacaactggt
ggtcaaaccaaggaaggcaaaagcgtcactgtagagactttggccgacttcgtcaaggca
gtaactagcacggagcctcttgtagtttacgccaagggcaacttcaacctcacctcgcga
gttcaagtccagtccaacaagtccctcattggcctcggaaagggtgctcagatcacaagt
catggcctcaacatttacaacaagaccaatgtgatcatccgcaactttggcttcacagcc
actgccgacgacgccatgacaatccgcaacagcacacgtatctggatcgatcacaacgaa
ttcactaccggcaacttccccgcgctaggccctgatgcattcgacggccaagtcgacatc
atccgtacatcagactggatcaccgtatcctggaactatttccacgaccactggaagagc
tcattggtaggcaacagcgacgcccttcgagacatcgaccaaggccacctccacgtcacc
taccaccacaactactggcgccacgaaggaacacgaggccctgccggccgcttcggccac
caacacgtctacaacaacctcttcgtcgacttcctctaccaagccatccactcccgaagt
gacaaccaagttctcgtcgaaggaaacgtattcaaaggaaacacacgcgaggcacttagc
acgtacggccttgttatcccagacgacagcccgaataccagccccgacggcgactttgaa
attgacggctttgcgaatctgggagcgaagaacgatttcggcaaggccggcgtgaatatc
actcaggttggaaattttacgcaagcgccgtacaagtataagcttacgccgctgaataag
gtggagggtgttgttaagaagggggctggcctgggtaagatctaa
DBGET
integrated database retrieval system
