Bipolaris zeicola: COCCADRAFT_90030
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Entry
COCCADRAFT_90030 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
bze
Bipolaris zeicola
Pathway
bze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCCADRAFT_90030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_90030
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
COCCADRAFT_90030
Prokaryotic type
Archaeal type
TFE
COCCADRAFT_90030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
19152893
NCBI-ProteinID:
XP_007709947
JGI:
90030
UniProt:
W6YDS1
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MKDPVEKRTKDPVQVVKQLLRTVVRMFYETEHIVIMDALCYHGALPVADMTIILDAGKNS
KHVSKVAGKLREAGLCSSYTQHVMRQGANKASSREFFYIDWRHAVDSIKYKIYKIDEGIK
RDAKPTTEKPEFKCLRCKSTYTTMQALDHPDDNPGPDDSGFLCARCGFRLDEIDPDAQAD
DIDDTPAKFNKLFGPLIETMKEIESMGSLPAMEPADIISERIELPRDRNVDPGTQVEVIE
TTVLRPTAVKGIDTGPEKINVQIGSSAEQNEKQRMAEKARQEKISMQNQLPSWHTQSTVI
KDAAGNTTAVKQEDNGVDTPTIKTEGGDAIASNQNLDAVFAQIEAERRRKEQEEEDEDDE
DEDEDEFEDVDVGTPSALPDAKRVKLESSAAPTPSAAATPAVITPAASNGGDESEEDEFE
DVN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcctgtagaaaagcgcacaaaggatcccgtacaagtcgtgaagcagttgcta
cggaccgtagtccgcatgttctacgagacagaacacattgtgatcatggatgccctatgt
taccacggcgcgctgcctgtggctgacatgaccattattctggatgcaggcaaaaactcg
aagcacgtgagcaaggtcgcgggtaagctcagggaggcgggtttgtgttcttcgtatact
caacatgtcatgcgccaaggtgcgaacaaagcatcgagcagagagttcttctacatcgac
tggcgccatgctgtcgattcgatcaagtacaagatctacaagattgacgagggaatcaag
agggatgcgaagcccacaaccgagaagcccgagttcaaatgcttgcgatgcaaatcgaca
tacacaaccatgcaagcactcgatcaccccgatgacaaccccggaccggacgacagtggt
tttctctgcgcgagatgcgggttccgactagacgagatcgatccagacgctcaagcagac
gatattgacgacaccccagcaaaattcaataagttgtttggtccacttattgagacaatg
aaagagattgagagtatgggtagccttccggcaatggagccagcagacataattagcgag
aggattgagctgcctcgcgacaggaacgtcgacccaggcactcaggttgaggttatagag
acgactgtattgcgaccaacggcagtgaagggcattgacacaggaccagagaagatcaac
gtccagataggatcgagtgccgagcagaatgagaagcagcgaatggcagagaaggcccgg
caagaaaagatctccatgcaaaaccagttgccttcatggcacactcagtcgactgtcatc
aaagatgctgccggaaatactacagcagtcaagcaagaggacaacggggtggacacgccc
accatcaagactgaaggaggtgatgccattgctagtaatcaaaacctggatgccgtcttt
gctcagattgaggctgagcgacgcagaaaggagcaggaggaagaagacgaggacgatgaa
gatgaggacgaagatgagttcgaagatgttgatgtcggtacgccaagtgctcttccggat
gcgaagcgtgtgaagttggaatcgtcagctgctccaacgccctcggctgccgcaacaccc
gctgtgattactccggcggcatcgaacggaggagacgaaagcgaagaagacgagttcgag
gacgtgaattga
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