Bipolaris zeicola: COCCADRAFT_92020
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Entry
COCCADRAFT_92020 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_92020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_92020
Spliceosome [BR:
bze03041
]
Complex C
Other components
Step II factors
COCCADRAFT_92020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_NWD2_C
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
19153290
NCBI-ProteinID:
XP_007710700
JGI:
92020
UniProt:
W6YBL9
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MAGGGSGRVPTGFAAETYISDHTFRQGQRSIESGEGSKKRKREGKGDSSIVSGAGAYKGP
WAKYEEQRPDAASDDEFGSDVEVEIVYEEDEIVDNSATAPKKLAGTDYRDTEAEGETSEF
VGSQQYDYQGRTYMHVPTDLDIKLTGDYEPKNFIPKKLIHTYKYHTKSITQVRFIPDSGH
LLLSASADSKIALWDVYHQRELLRTYSGHTKSVVDVDFNPSGTQFVSASYDRYMKIWDTE
TGKCLNKFTTGKTPHVVRINPSMPHEFLVGMSDKKIMQYDTRSGEMVQEYDHHLGPVNTI
TFCDENRRFITTSDDKSLRAWEYGIPVPIKFIAEPYMFSMVRSSPHPSGKYVAFQSSDNQ
ITVYSSTDRFRQNRKKSYRGHNVAGYAPDVAISPDGQFISSGDSGGFICFWDWKTCKMYH
KIPASDAPVLAVQWHPRETSKVVAGDLNGALKLYD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctgggggaggctccggtagagtcccaaccggtttcgcagcggaaacatacatcagt
gatcatacattccgacaaggtcaacgttcgatcgaaagcggagagggatccaagaaaaga
aagcgcgagggcaagggtgactcaagtattgtgagtggagctggtgcatacaaaggaccc
tgggcaaaatacgaagaacaaaggccagacgccgcctcggacgatgagtttggatcagat
gtggaggtggagatagtgtacgaggaagacgagattgtcgacaactctgcgactgcgcct
aagaagcttgcaggtacggactaccgcgatactgaggccgagggcgagacgagtgaattt
gttggtagccagcaatacgactaccaaggacggacctacatgcacgtacctacggacctc
gatatcaagctcactggcgactatgaaccaaagaacttcataccaaagaagctcatccac
acctacaaataccacactaagtcgattacacaagtccgcttcatacctgacagcggtcac
ctcctcctctctgcttcggccgactccaagattgcactatgggacgtgtatcaccagcgc
gagctgctgcgaacgtattccggtcatacgaagtcggttgtcgacgttgatttcaatccc
agtggtacgcaattcgtgtccgctagctacgaccgctacatgaagatatgggatacggag
actggcaagtgcctgaataaattcacaactggaaagacaccgcacgtcgtgcgcatcaat
ccaagcatgccccacgagttcctggtcggtatgagtgataagaagatcatgcagtacgac
acaagaagcggagagatggtgcaagaatacgaccaccatctggggcctgtcaacacaatc
accttctgcgacgagaaccgccgtttcatcacgacatccgacgacaagtctctccgcgca
tgggaatacggcatccctgtccctatcaagttcattgctgaaccgtacatgttttccatg
gtccgctcctcgccccacccgtctggcaaatacgttgccttccagtcgtcagataatcag
attacggtgtacagttcgacagaccgcttcaggcaaaatcgaaagaagagctacagaggg
cacaacgtggctggatatgcacccgatgtggcaatcagtcctgacgggcaattcatcagc
tctggtgacagcggtggtttcatttgtttctgggattggaagacgtgtaaaatgtaccac
aagattccagccagcgatgcgccagtgctcgcagtacagtggcatccaagggagacatcg
aaggttgtggctggagacctcaatggtgcgctgaaattgtatgattaa
DBGET
integrated database retrieval system