Bipolaris zeicola: COCCADRAFT_9226
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Entry
COCCADRAFT_9226 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
bze
Bipolaris zeicola
Pathway
bze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCCADRAFT_9226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_9226
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
Pre-60S particles
GTPases
COCCADRAFT_9226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
19153339
NCBI-ProteinID:
XP_007717295
JGI:
9226
UniProt:
W6XMC2
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MPVVASQKLVALQQAADGIRNICILAHVDHGKTSLTDALIATNGIISPKLAGKIRYLDSR
PDEQLRGITMESSAISLFFSSLRRSAPDATPEHKEFLINLIDSPGHIDFSYEVSTASRLC
DGAVVLVDAVEGVCSQTVTVLRQTWIEKLKPLLVINKMDRLITELKMSPAEAYTHLSKLL
EQVNAVMGSFYQGERMEDDLRWREKMEERLNAAAAAADKTDTRSSSMLENGDSIDMTSTP
AEYEEKDDEDIYFAPEKNNVIFGSAIDGWAFTVRQFAGLYEKKLGIKRSILEKVLWGDFY
LDPKTKRVLSSKHLKGRHLKPMFVQLVLDNIWAVYEATTGGNNGKGDATMVEKITKSLNL
NLPAHVMRSRDPRTLLMALFAAWLPLSTALLVSVTEYLPPPSKAQFERMPEIIDTSPGAD
YVDPQVRDAMTNFKTSADAPVVAYVSKMISVPSSELPQNKRRTGALTAEEARELGRKKRA
EIARQQAIANGQDPDVGGVTDALGSSTIGETETPVEEAPAAEEEAEHLIGFSRIFSGTLN
VGDEVYVLSPKFTPANPHAAPEPQKVKITALYLMMGRGLEPLTSVPAGVVFGIGGLEGHI
LKSGTLCSQLPGAVNLAGVQMGTEPIVRVALEPENPYDLDKMIRGLKLLVQSDPCAEYEQ
LPSGEHVILTAGELHLERCLKDLKERFAKCEIQAGEPIVPYRESIVAAAEMNPPKDPNLP
RGTVIGETASKQVSVRLRVRPLPASVTDFLGKNAGAIKKLYSDRRAEDEGGNAEHQEHGT
EDDGIQEAEKREIGQSLSLEEFKKQLEDAFAEAKGQKEVWTDVIEKITAFGPRRIGPNIL
VDATPDGICSKALRDSSSPNPDAEEPSDRIISPRTFSSTIAYAFQLATAQGPCCAEPVQG
IAVFLESVALNLGEEEGAQQDRGRLTGEVIKAVRSSIHQGFLDWSPRMLLAMYSCEIQAS
TDVLGRVYAVLTRRRGTILSETLSSTSSASTTGSQTFTINALLPVAESFGFSDEIRKRSS
GSASPQLRFAGFEMLDEDPFWVPFTEDELEDLGELADRENVAKRYVDKVRKRKGLRVAGE
KVVVDAEKQKTLKR
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgttgccagtcaaaagctcgtcgccctgcagcaggctgctgacggcatcagg
aacatctgcatcctggcccacgtcgaccatggcaagacgtccctcaccgacgccctcatc
gccaccaatggcatcatctcccccaagctcgccggcaagatccgctacctcgactcgagg
cccgatgagcagctgcgtggcatcaccatggagtcgtcggccatctccctcttcttttcc
tcgctacgtcgctccgcccccgacgccacccccgagcacaaggaattcctcatcaacctc
atagactcccccggacacatagactttagctacgaggtatctacagcatcccgcctctgc
gatggcgccgtcgtgctcgtagatgccgtcgagggcgtttgcagccagactgtcaccgtc
ctgcgacagacgtggatagagaagcttaagcccctgctcgtcatcaacaagatggatagg
ctaatcacagaactcaaaatgagccctgccgaggcatacacgcacttgagcaaactgctt
gaacaggtaaacgccgtcatgggcagcttctaccaaggcgagcgcatggaggatgatctc
cggtggcgcgagaaaatggaagagcgcctcaatgccgctgccgctgctgctgacaagact
gacacgcgatcctcatctatgctagaaaatggtgatagcattgacatgaccagtaccccc
gccgagtacgaggaaaaggacgatgaagacatctactttgccccagaaaagaacaacgtc
atctttggcagtgccattgacggctgggctttcactgtgcgccagtttgcaggcctgtac
gagaagaagctgggcatcaagcgctctattctcgaaaaagtcctctggggtgacttctac
ctcgaccccaagaccaagcgtgtccttagctcaaaacatctcaagggccgacacctcaag
cccatgtttgtccagctcgtcttggacaacatctgggccgtatacgaggccactacagga
ggtaacaatgggaagggagatgctaccatggtcgagaagattaccaagtcgctcaacctc
aacctccctgcacacgttatgcgctcccgcgaccccaggactctcttgatggcgcttttc
gcagcctggcttccgctctcgaccgctctcttagtatccgtgaccgaatacctacctcca
ccatccaaagcgcagttcgaacgcatgcctgagattattgacacctcaccgggtgccgat
tacgttgatccacaagtacgagatgcaatgaccaattttaaaacatcagccgatgcccct
gtcgtagcttacgttagcaaaatgatctcggtaccttcgagcgaactaccccagaacaag
cgaaggaccggcgctctgactgccgaagaggcaagagagttggggagaaagaaaagggcc
gagattgcccgccagcaagcaatcgccaatggccaagatccagatgttggtggtgtcaca
gatgctttgggatcttcaaccattggagaaaccgagactccggtagaggaggctccggca
gctgaggaagaggcagaacacctgatcggtttctcgcgcatcttttcgggaactctcaac
gtgggtgatgaagtgtacgttctcagtccaaagttcactcccgcaaacccacacgctgcg
ccggaaccccaaaaggtcaagatcacggctttgtacctcatgatgggccgcggcttggag
cccttgacctcggtacctgcgggcgttgtctttggaattggtggactcgaaggacacata
ctcaagtccggtacgctgtgttcccaattacccggagctgtcaacctggctggtgtccag
atgggcactgagccaattgtccgtgttgcccttgagcctgagaacccctatgatttggac
aagatgatcagaggcttgaaactccttgttcaaagcgacccgtgcgcagaatacgagcaa
ctgcccagtggagagcacgtgattctcactgcgggagaactgcatttggagagatgtttg
aaggatttgaaagaacgattcgccaagtgcgagatacaggctggcgagcccatcgtacct
taccgggagtccattgtggcagcagccgagatgaatccgccaaaggaccctaatcttccc
agaggtaccgttattggcgagacagcgagcaaacaggtgtcagtacgcctgcgggtacgc
ccactaccagccagcgtcaccgatttcttgggaaagaacgccggcgccatcaagaaacta
tactctgaccgacgagcagaagacgaaggcggaaatgcagagcatcaggagcatggaact
gaagacgatggcatccaagaagcggagaaacgtgagataggacagagtctcagcttggaa
gagttcaaaaagcagcttgaagatgcttttgctgaagcaaagggacaaaaggaagtgtgg
accgatgtgattgagaagattactgcgtttggaccccggagaataggacctaacattctc
gtggatgcaaccccagatggcatctgcagcaaggcactacgcgactcatcgtctcccaac
ccagacgcagaagaaccatcagaccgcataatatccccccgcaccttttcctcaactatt
gcctacgcctttcagctagccacagcccaaggcccttgctgcgcggagcccgtgcaaggc
atcgccgtcttcttggaatccgtggcgctgaacctgggcgaagaagaaggtgcgcagcaa
gatcgtggccgtctgacaggcgaagttatcaaagccgtacgctcgtcgatccaccagggc
ttccttgactggtccccccgcatgctcctcgccatgtacagctgcgaaatccaagcttcg
accgatgtcctgggtcgtgtctacgccgtcctgactcgtcggcgaggcaccattctcagc
gaaaccctatcatcaacttcctcggcgtccacaacgggatcccaaacattcaccatcaac
gcgctcctccccgttgccgaatcctttggcttcagcgacgagatccgcaagaggagttcg
ggctcagcatcgccccagctccgctttgcaggatttgaaatgctcgacgaagatcccttc
tgggtcccttttacggaagatgaactcgaggatctgggtgagttggcggaccgcgagaat
gtggccaagcggtatgtggataaggtgaggaagcgcaaggggcttcgtgttgcgggcgag
aaggtcgtggttgatgcggagaagcagaagacgctcaaaaggtaa
DBGET
integrated database retrieval system