Bipolaris zeicola: COCCADRAFT_9392
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Entry
COCCADRAFT_9392 CDS
T03110
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bze
Bipolaris zeicola
Pathway
bze00040
Pentose and glucuronate interconversions
bze01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCCADRAFT_9392
Enzymes [BR:
bze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCCADRAFT_9392
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
19153660
NCBI-ProteinID:
XP_007717507
JGI:
9392
UniProt:
W6XSC6
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Position
Unknown
AA seq
317 aa
AA seq
DB search
MRFFEVATVALTAASTAYGAPMEKRAAAVDELVGFGAGTTGGGSGAGTTVTNCAGLTAAA
KVGGVIKIKGTLTGCGIVRFDVPGTSILGVGKDAGITDGGFRFYKTSNIIVRNLKFHRAP
EGKDLIDIEATTKVWIDHNDFSSVGITGDKDKYDGLLDAKSGSDFLTFSWNKFHDHWKGS
LVGHSDNNGSVDKGKLRVTYHHNSFTAVNSRLPSIRFGTGHIYSSCFNGGVSGINSRMGA
QVLVESNSFTNVAKSVVTNLDSDEEGFATEKNNVFSNSPTQITKQGSFTPSYKYTVDPAA
SVCSIVAKSAGVGVVTF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcttcgaggttgccactgtggctttgacagctgcttccaccgcctatggcgcc
cctatggagaagcgcgctgccgccgttgacgagcttgttggttttggtgctggcaccact
ggaggaggaagcggagccggtaccactgtcaccaactgcgccggcctgactgctgccgcc
aaggtcggaggtgtcatcaagatcaagggtacgctcacaggctgtggcattgttcgcttc
gacgtccccggcacctccatcctcggtgtaggcaaggacgccggaatcaccgacggtggt
ttccgcttctacaagacttcaaacatcattgtccgtaacctgaagttccaccgtgcaccc
gaaggcaaggacctcatcgacattgaggccaccaccaaggtctggatcgatcacaacgac
ttctccagcgttggcatcaccggcgacaaggacaagtacgatggcctcttggacgcaaag
tctggatccgactttttgactttctcatggaacaagttccacgaccactggaagggttcc
ctcgtcggccactccgacaacaacggatcagtagacaagggcaagctgcgcgtgacttac
caccacaactccttcacggcagtcaactcgcgtctgccgtccatccgcttcggcacaggc
cacatctacagctcgtgcttcaacggcggtgtttccggcatcaactcgcgcatgggcgcc
caagtgctcgtcgagtccaactccttcaccaacgttgccaagtcagtcgttaccaacctc
gactctgacgaggagggctttgcgacggagaagaacaatgttttcagcaacagccctacc
cagattaccaagcagggctctttcaccccaagctacaagtacactgttgaccctgcggcc
agcgtctgcagcatcgtggccaagagcgctggtgttggtgttgtcaccttctaa
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