Bipolaris zeicola: COCCADRAFT_94113
Help
Entry
COCCADRAFT_94113 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
bze
Bipolaris zeicola
Pathway
bze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCCADRAFT_94113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_94113
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
COCCADRAFT_94113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
AAA_23
Rrn6_HB
AAA_27
AAA_21
Motif
Other DBs
NCBI-GeneID:
19153695
NCBI-ProteinID:
XP_007711527
JGI:
94113
UniProt:
W6YFA2
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MARGVEGNEMSTPRPSQKKQPSSVSQSGKGQKSILGFFQKKTTNSPSPAPSDVTPDQKTP
TSKIASKAFTKPSAAITPVPSSDAPDHSSPIKQDQELTVGRNKENEIADVTPSSPTRKAR
KPVNYAESDDEDDDVLGPIANNARGRATKRQRMVVDDDSDDEFGLDAATQRAMLEEEEED
DDVDDFIVPDDSEEEVVSKKRKRPTSTKPRTKASPASSPPPIVNDNDVEDEADIVMNSTS
TAQQWIYDPENPTVFKPRKAVPSLKKELSVRAKAKPSASEPEARYPWLANMQDADRHPPD
HPDYDPRTLFIPPAAWREFSPFEKQYWEIKSKWWDTIVFFKKGKFYELYEKDASIGHQLF
DLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVARVDQMESALGKEMRERDDKGKTPKK
AEKKGKEVIRRELATVLTSGTLVDTGMLQSEMSTYCMAIKEIDRDNLPAFGIAFVDTATA
QFQLCEFTDDIDMTKFETLIAQMRPGELLLEKSCVSAKALRILKNNTGPTTIWNWLKLNK
EFWPADITIREIEVNSYFESPTEDNIEAWPPVLREAREKELVMSAFGALLQYLRTLMIER
DLVTLGNFQWYDPIRKATSLVLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRL
LRQWVCHPLADAQKINARLDAVDALNKDSAIMENFSGSLSKLPDLERLISRVHAGRCKAQ
DFLKVLEGFEQIEYTISLLKQFSEGEGVIGQLISSMPDLAACLEKWKSAFDREAARKDGI
LIPEAGVEEDYDNSQADIDSCEANLEALLKKVRKEQGSNAIIYNHLGKEIYQLEVPKKVK
VPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETHGQITREVATRFCQRFDEDYKIWLA
AVKIIAQLDCLISLAKASASLGEPSCRPVFVEGERTIVEFEELRHPCMLNTVDDFIPNDI
KLGGDAANISLLTGANAAGKSTILRMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGAN
DNIFAAQSTFFVELSETQKILSEATSRSLVILDELGRGTSSYDGVAVAQAVLHDVATRVG
CVGFFATHYRSLAKEFEFHPEVQNKRMRIHVDDESKSITFLYKLEEGVAEGSFGMHCAAM
CGIPSKVIENAEKAAKEWEHTSRLGERMEVKKDEGGVYVPLGLQSDVAWALREGLEGVGE
RAMDVLLEAIAAL
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcggtgtcgaaggaaacgaaatgtcaacgccccgcccatcccaaaagaagcaa
ccttcctcagtctcccagtcagggaagggccagaaatccattctcggcttcttccagaag
aaaactaccaattcaccaagccccgcaccgtctgatgtcacaccggaccaaaaaacgccc
acttccaaaatcgcctccaaggcctttacaaagccttctgctgccatcacgccggttccc
agcagcgatgctccagaccactcaagtcctatcaaacaagaccaagagctcacagtaggg
cggaacaaggagaatgaaatagcagatgttactcctagtagcccaacacgtaaagctaga
aaacccgtcaattacgccgaatccgacgatgaagatgacgatgtactcggacctatcgca
aacaatgcgaggggtcgggctacaaagcgccagcgaatggttgtcgacgacgattccgac
gatgagtttggtttggacgctgccacgcagagagcaatgctggaagaggaagaggaagac
gatgatgttgatgatttcatcgtacccgatgattctgaagaagaagtcgtatcgaagaag
cgcaaacgcccaacatctacaaagccacgcaccaaagcctcaccggcatcatcaccacca
cctattgtcaatgacaatgatgtcgaggatgaagcagacatcgtaatgaatagcacatct
acagcacaacaatggatatacgatcccgagaatcccacggtattcaagccacgaaaagcg
gttccttctttgaagaaagaactaagcgtaagagccaaagcgaagccctctgcttcagaa
cctgaggcaagatacccatggctagcgaacatgcaagacgccgaccgccatccacccgac
catcctgactacgatccccgtaccttgttcatcccgccagctgcctggcgtgaattttcg
ccttttgaaaagcagtactgggagatcaagagcaagtggtgggacactatagttttcttc
aagaaaggaaagttttacgagctctacgagaaagatgcatcgatcggccaccagctcttt
gatctcaagctgactgatcgtgtcaacatgaggatggtgggtgttccagaagcctcgttg
gatatgtgggcaacacagtttgtggcggctggctacaaagtcgctagggttgaccagatg
gaatccgctttgggcaaagagatgcgcgaacgtgacgataagggcaaaactccaaagaaa
gctgagaagaaaggcaaggaagtcattcgccgagaactggccactgttctaacatcaggt
acccttgtggacactggcatgctccagagcgaaatgtcgacttactgcatggcgatcaaa
gagattgaccgtgacaatttgcccgctttcggaattgcgtttgttgacactgcgacggcg
cagtttcagctttgtgagtttacagatgacattgacatgaccaaattcgaaactctcatt
gcgcaaatgaggcccggcgagttgctcttagaaaagtcgtgtgtttcagcaaaggcgctt
cgtattctgaagaacaacactggaccaaccaccatctggaactggctgaagctgaacaaa
gaattctggccagccgatatcacgatccgagaaatcgaagtcaacagttacttcgagtcg
ccaacagaagataacatcgaagcctggccaccggtgcttcgcgaagcccgcgaaaaagaa
cttgtcatgtccgcattcggtgccctcctccagtatctgcgaacattgatgattgagcgc
gatcttgttacgctcggcaacttccagtggtacgatcccattcgcaaagcgacaagcttg
gtgctcgacggacagagcttgatcaatctggaaatctttgcaaatacgtttgatggagcg
acagagggcacattgttcgctatgttgaatcgctgcatcacaccgtttggcaagcgacta
ctccgacaatgggtttgtcatccactggcagacgcacaaaagatcaacgctcgccttgac
gctgtagatgcgctgaataaggactcagccattatggagaacttcagcggctcactgagt
aagctcccagatcttgagcgtcttatctcccgcgtgcacgctggccggtgcaaggcacaa
gacttcctgaaggtcttggaaggtttcgagcagattgagtacaccatcagtttgctgaag
cagttcagcgaaggagagggcgtcattggccagctcatctcatcgatgccggatctagct
gcatgtctcgagaagtggaagtctgcttttgaccgtgaagcagccaggaaagatggaatt
ctgatccctgaagctggtgttgaggaagactatgataatagtcaggcggatattgatagt
tgcgaggccaatctcgaggcgctgttgaagaaggtgcgcaaagaacagggctcgaatgca
atcatctacaatcacctcggaaaagagatttatcaactggaagtgccgaagaaggtcaag
gtgcccaatagctgggatcaaatgtcggccacagccaaggtcactcgctattacacgccc
gagttgcggaagctggtgcgagcattgcaagaagcgcaagagactcatggtcaaatcact
cgcgaggttgccactcgcttctgccagcgctttgacgaggactacaagatttggcttgca
gcagtcaagatcattgctcagctcgactgcctcattagtcttgcaaaggcatctgcgtcg
ctgggagagccaagttgccgacccgtcttcgtggagggcgaacgaaccattgttgagttc
gaggagcttcgccacccgtgcatgctcaacacagtcgatgactttatccccaatgatatt
aagctgggcggtgacgcggccaacattagcctgctcacgggtgccaacgcagctggtaaa
tcaaccatcctgcgtatgacatgcatagctgttatcctcgcccaagtgggttgctacttg
ccgtgtacatcggccagactcacacccgtcgaccgcatcatgtctcgtctaggcgccaac
gacaacatcttcgcagcacaatccaccttcttcgtagaactgtctgaaacacaaaagatt
ctgtcagaagcaacatcacgatcgttggtcatcctggacgaactgggccgtggcacctca
tcctacgacggcgtagcagtcgcacaggctgtgctacacgatgttgcaacgagggtgggc
tgcgtgggcttcttcgctacgcattaccggtcgctcgccaaggagtttgaattccacccc
gaagtccagaataagcggatgcgtatccatgttgatgatgagtctaaatcgattaccttc
ttgtacaaacttgaagagggcgttgcagagggcagctttggtatgcattgcgctgccatg
tgtggtatcccaagcaaggtcattgagaatgcggagaaggcggccaaggagtgggagcat
acgagtaggctgggtgagaggatggaggtgaagaaggatgagggtggtgtgtatgtgcca
ctgggtttgcagagtgatgttgcgtgggcgttgcgagaagggttggaaggagtgggagaa
cgagcgatggatgtgctgctcgaagctattgctgcgctttga
DBGET
integrated database retrieval system
