Bipolaris zeicola: COCCADRAFT_94608
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Entry
COCCADRAFT_94608 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bze
Bipolaris zeicola
Pathway
bze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCADRAFT_94608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_94608
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
COCCADRAFT_94608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
19153783
NCBI-ProteinID:
XP_007711710
JGI:
94608
UniProt:
W6YES8
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MQHFLAHQQQYGEWGQGHHQQPQHHVAQHGQHQAQAAQLHAQQQAQAVQAAAQRQYHQQL
AANNGSTLPGNNAVPRGPANDVQAADVGMTDENRRVLEWVTQLMKPATREAALLELSKKR
EQVPELALILWHSFGVMASLLQEIISVYPLLNPSQLTAAASNRVCNALALLQCVASHTET
RGLFLSAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPL
CLRIMETGSELSKTVAIFIVQKILLDDIGLAYICQTYERFYAVGTVLSNMVNQLVEQQTV
RLLKHVVRCFLRLSDNARAREALRQSLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDN
VVDAANNQQLMH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatttcctcgcgcatcagcaacagtatggcgagtggggtcagggccaccaccag
cagccgcaacatcacgtagcccaacatggacagcatcaagcgcaggccgcccagttgcat
gcccagcagcaggctcaggcggttcaagcagctgcgcagcgccagtaccaccagcagctt
gcggccaacaatggctccacgctgcccggaaacaacgccgttccccgaggacctgccaac
gacgtccaggcagccgatgtcggcatgactgatgagaataggcgcgtgttggaatgggta
acccagcttatgaagcctgctactagggaggccgcgcttctggagttgagcaagaagcgg
gagcaggtccccgagctggctctgattctctggcattctttcggtgttatggcttctctc
ctccaagagatcatctccgtttacccgctgcttaacccttcgcaattgaccgccgcagca
tctaaccgtgtctgcaatgctctcgcgcttcttcaatgcgtggcttctcatactgaaacc
cgtggcctgtttttgagtgcgcacattccgctcttcctgtatccgtttctcaacacgacg
tccaaatcacgacccttcgaatacctacgtcttacgtctctcggtgtaattggcgctctg
gtcaagaacgactcttctgaagtcatcaatttccttctcactactgagattatcccactt
tgtctccgtatcatggagacgggctcggaactcagcaagactgtggcgattttcattgtc
cagaagatcttgctggacgacattggacttgcatatatctgccaaacctacgagcgtttc
tatgccgtaggcaccgtcttgagcaatatggtcaatcagctcgttgagcaacagacggtt
cgcttactgaagcacgttgtgcgttgctttctccgcttgagcgataatgctcgcgctcgc
gaggcgctgcgccagtccttacccgagccgctccgagatgctactttctcctctgttctg
cgggacgacgctgccaccaagcgctgccttgctcaactcttgatcaatctctccgacaat
gttgtcgacgcggcaaataaccaacagctcatgcactga
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