KEGG   Bipolaris zeicola: COCCADRAFT_94608
Entry
COCCADRAFT_94608  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
bze  Bipolaris zeicola
Pathway
bze03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    COCCADRAFT_94608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_94608
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     COCCADRAFT_94608
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 19153783
NCBI-ProteinID: XP_007711710
JGI: 94608
UniProt: W6YES8
LinkDB
Position
Unknown
AA seq 372 aa
MQHFLAHQQQYGEWGQGHHQQPQHHVAQHGQHQAQAAQLHAQQQAQAVQAAAQRQYHQQL
AANNGSTLPGNNAVPRGPANDVQAADVGMTDENRRVLEWVTQLMKPATREAALLELSKKR
EQVPELALILWHSFGVMASLLQEIISVYPLLNPSQLTAAASNRVCNALALLQCVASHTET
RGLFLSAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPL
CLRIMETGSELSKTVAIFIVQKILLDDIGLAYICQTYERFYAVGTVLSNMVNQLVEQQTV
RLLKHVVRCFLRLSDNARAREALRQSLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDN
VVDAANNQQLMH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgcaacatttcctcgcgcatcagcaacagtatggcgagtggggtcagggccaccaccag
cagccgcaacatcacgtagcccaacatggacagcatcaagcgcaggccgcccagttgcat
gcccagcagcaggctcaggcggttcaagcagctgcgcagcgccagtaccaccagcagctt
gcggccaacaatggctccacgctgcccggaaacaacgccgttccccgaggacctgccaac
gacgtccaggcagccgatgtcggcatgactgatgagaataggcgcgtgttggaatgggta
acccagcttatgaagcctgctactagggaggccgcgcttctggagttgagcaagaagcgg
gagcaggtccccgagctggctctgattctctggcattctttcggtgttatggcttctctc
ctccaagagatcatctccgtttacccgctgcttaacccttcgcaattgaccgccgcagca
tctaaccgtgtctgcaatgctctcgcgcttcttcaatgcgtggcttctcatactgaaacc
cgtggcctgtttttgagtgcgcacattccgctcttcctgtatccgtttctcaacacgacg
tccaaatcacgacccttcgaatacctacgtcttacgtctctcggtgtaattggcgctctg
gtcaagaacgactcttctgaagtcatcaatttccttctcactactgagattatcccactt
tgtctccgtatcatggagacgggctcggaactcagcaagactgtggcgattttcattgtc
cagaagatcttgctggacgacattggacttgcatatatctgccaaacctacgagcgtttc
tatgccgtaggcaccgtcttgagcaatatggtcaatcagctcgttgagcaacagacggtt
cgcttactgaagcacgttgtgcgttgctttctccgcttgagcgataatgctcgcgctcgc
gaggcgctgcgccagtccttacccgagccgctccgagatgctactttctcctctgttctg
cgggacgacgctgccaccaagcgctgccttgctcaactcttgatcaatctctccgacaat
gttgtcgacgcggcaaataaccaacagctcatgcactga

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