KEGG   Bipolaris zeicola: COCCADRAFT_94780
Entry
COCCADRAFT_94780  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
bze  Bipolaris zeicola
Pathway
bze03030  DNA replication
bze03410  Base excision repair
bze03420  Nucleotide excision repair
bze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCCADRAFT_94780
   03410 Base excision repair
    COCCADRAFT_94780
   03420 Nucleotide excision repair
    COCCADRAFT_94780
   03430 Mismatch repair
    COCCADRAFT_94780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bze03032]
    COCCADRAFT_94780
   03036 Chromosome and associated proteins [BR:bze03036]
    COCCADRAFT_94780
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_94780
DNA replication proteins [BR:bze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    COCCADRAFT_94780
  DNA Replication Termination Factors
   ELG1-RFC complex
    COCCADRAFT_94780
Chromosome and associated proteins [BR:bze03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    COCCADRAFT_94780
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     COCCADRAFT_94780
  Check point factors
   HRAD17(Rad24)-RFC complex
    COCCADRAFT_94780
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_16 RCF1-5-like_lid AAA_24 AAA_5 AAA_assoc_2 AAA_lid_RFC1 AAA_22 AAA_30 AAA_11 DUF815 AAA_19 RuvB_N AAA_14 AAA_3 Mg_chelatase SLFN-g3_helicase DEAD ResIII Sigma54_activat PhoH AAA_28 AAA_RNF213_4 bpMoxR AAA_18 AAA_7 nSTAND_NTPase5 ATPase_2 nSTAND3 AAA_25 RNA_helicase DNAX_ATPase_lid DO-GTPase1 ABC_tran UvrD-helicase
Other DBs
NCBI-GeneID: 19153816
NCBI-ProteinID: XP_007711816
JGI: 94780
UniProt: W6Y8T2
LinkDB
Position
Unknown
AA seq 394 aa
MSDIEDEMDVDAPVDKSISFGGDSKKGKRSAANLPVEAEDTLPWYVVEKYRPASLDDVEG
HKDIIATINKFVDSNRLPHLLLYGPPGTGKTSTVLALARRIYGNKNMRQMVLELNASDDR
GIEVVREQIKTFSSTKQIFSAAPKAGDSSLATFKLIVLDEADAMTSTAQMALRRIMEKYT
ANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQDIRHLVDKVIEEEKVNITQDATDSLV
TLSKGDMRRALNVLQACHASSTPLQPPGKPAVDPSSIVRDQITQTTIYDCIAAPHPSDIK
YIIETLLSKNDMTECLRTINNLKTLKGLALADILTAISEELVANDVPPQVMVTWMSGLAD
IEYRLSGGGSEAIQTGAAIGVVRTGVELLENGKK
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgtcggacattgaagatgaaatggacgttgatgcgcccgtcgacaagtccatcagcttt
ggcggagactcgaaaaagggcaagcggagcgctgccaatctgcctgtagaagctgaagac
acattgccatggtatgtggtagaaaagtacagaccagcgtctctcgacgacgtagaaggc
cacaaggacatcatagccacaatcaacaaatttgtcgactcgaaccgattaccacatctt
cttctctatggtccaccaggaaccggaaagacttcgaccgtcctagcactcgcacgacgt
atatacgggaacaagaacatgcggcaaatggttctcgaactaaacgcatcagatgacaga
ggtatcgaagtggtcagagagcagatcaaaacatttagcagtaccaagcaaatcttctct
gccgcacccaaagcaggagattcttcgctggcaactttcaaactcattgttctcgatgaa
gccgacgccatgacttccaccgcccagatggcactgagacgaatcatggagaagtacacg
gcaaacacacgtttctgcatcattgcaaactacacacacaaactctcgcccgccctgctc
tcgcgttgtacgagatttcgattttcaccgctcaaggaccaggacattaggcacctagtc
gacaaggtgattgaggaggaaaaggtcaacattacacaagacgccaccgattcgctcgtc
actctgagcaagggagatatgagacgagcgctcaacgtgctgcaagcctgccatgcttcc
agcacgccactccagcccccaggcaagcccgcggtcgacccgagttcaatcgtgcgtgac
caaatcactcagaccaccatctacgactgtatagcagcaccacatccttcagacatcaag
tacatcatcgaaacactgctgtctaagaatgacatgacagagtgtctacgaaccataaat
aatctcaagacattgaagggactggcgctcgcagatattctaacggcgattagcgaagag
ctggtcgcgaatgacgtgccaccacaagttatggtgacatggatgtcaggtctggcagat
attgagtatagactgagcggaggtggtagtgaagcgatccagactggtgcagcgattggt
gttgtaagaacaggggtggagcttctggagaacggcaagaagtga

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