Bipolaris zeicola: COCCADRAFT_95029
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Entry
COCCADRAFT_95029 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bze
Bipolaris zeicola
Pathway
bze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCADRAFT_95029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_95029
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
COCCADRAFT_95029
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
COCCADRAFT_95029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Gal_mutarotas_2
WKF
EAD9
DUF948
Chal_sti_synt_C
CorA
DUF1192
Motif
Other DBs
NCBI-GeneID:
19153865
NCBI-ProteinID:
XP_007711882
JGI:
95029
UniProt:
W6Y2B4
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAARKLQQEIDKCFKKVAEGVATFESIYEKIMQTGNPSQKEKLEDQLKKEIKKLQRSRDQ
IKTWAAMSEIKDKKPLLDHRKLIETQMERFKAVEKEMKTKAYSKEGLQLASKIDPKDREK
MEVVEFLQHMNEELERQIETIEAEIETLNANVKKSKKGDNSKVERVSELEESVERNKWHQ
SKLELLQRALENGSVETEQVKEIEDSIKYYVESNQDPEFMDDDTLYDDFNLQEEEAIYGL
GENLDHVSSHESQSIADDTPDTEVRPPAPKPKATEAVQQGARRSSTQMKSPLPALATLHT
PSPNAANNTANAMKPAPIPTRTPGEPLKYASAAAAAAASDRNGVGIAPLPPPPGAAAAQP
SLAAGGARASATSSPAITHSQPASRAQQAESAQASPAPAASVPVAAPVEKDPPLQAAVSD
DVSKANRRTPVPEPVEEEESQATTPPLTNGESHAEDEDEESVYHLPSSLQDLLDSFEATK
NDISASASKPPDERMLMASMATAPESADTEVPRHYRPQNPYPFTPAHYPQEPLPIFDDPR
LYSRIETDALFYAFYYRQGTYQQYLAAKALKSQSWRFHKQYQTWFQRHEEPKAITEDYEQ
GTYRFFDYESTWMNRRKADFRFAYKFLEDEL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacggaaactccagcaggagatcgacaaatgcttcaagaaggtcgccgaaggc
gtcgcgactttcgagagcatatatgagaagattatgcagacgggcaatccatcgcagaag
gagaaactcgaagaccagctgaagaaggagattaagaagctgcaacgatcgcgggaccag
atcaagacatgggctgccatgtctgagatcaaggacaagaagccgctactcgatcacagg
aaactcatcgagacacaaatggagcgcttcaaggccgtggaaaaggagatgaagacaaaa
gcatattccaaggagggcctccaattagcctccaagattgaccccaaggacagagaaaag
atggaagtggtcgaattcctacaacatatgaacgaagagctcgagcggcaaatagagaca
attgaagctgaaatcgagacgctgaacgctaatgtcaaaaagtcaaagaagggcgacaat
tcaaaggtggagcgcgtgtcggagctggaagagtcagttgagcggaataaatggcaccaa
tccaaactggagctgctccaacgagcattggagaacggtagcgttgagacggaacaggtc
aaggagattgaggacagcatcaagtactacgtcgaaagcaatcaggaccccgagttcatg
gacgacgacacattatacgatgacttcaacctacaagaggaggaggccatctacggtctg
ggcgagaatctggaccatgtctcgtcacacgaatcgcagtcaatagccgacgatacaccc
gacacagaagtacgtccaccggcaccgaaaccaaaggcgaccgaagcagtgcaacaagga
gcaagacggtcgtcgacacagatgaagtcgccattaccagcgctagccacattgcatacg
ccctcgcctaatgctgcaaataatacggcaaacgctatgaagcctgcaccgataccaaca
cgaacgccaggagagccattaaagtatgcatcggctgctgcggctgcagctgcgagcgac
aggaacggagttggcattgctccactgccaccaccaccaggagctgctgcagcccaacca
agtctcgctgctggcggtgcacgtgcaagtgcaacaagctcgcccgccataacacattcc
caaccagcctcacgtgcacagcaggccgaatccgcacaggcctcacctgctcctgctgcc
agcgtacctgtggccgctcctgtagagaaggacccacctttgcaagctgcagtgtctgat
gacgtctccaaggccaacagaagaacgcctgtccctgagccagtggaagaagaggaatcc
caagctactacgccgccactgacgaacggagaatcgcatgcagaagatgaagacgaagag
tcggtctaccatctcccctccagtctgcaggatctgcttgattcgttcgaggcaaccaag
aatgatatttctgcctcagcatcaaaacctccggatgagcgtatgctaatggcatcaatg
gctactgcgcccgagtctgcagataccgaggtgccgcgtcactaccgtccccaaaatcct
tatccattcacccccgctcactacccgcaagagcccttgcccatcttcgacgaccctcgt
ctttattcccgcattgagacggacgctctcttctacgccttctattaccgccagggtaca
tatcaacagtacctagccgccaaagcattgaagtcacagagttggagattccataagcag
taccagacatggtttcaacgccacgaagaaccaaaagcaattactgaagactatgagcag
ggaacataccgattcttcgactatgaaagcacatggatgaaccgtagaaaggcagacttc
cgatttgcgtacaagtttttggaagacgagctataa
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