Bipolaris zeicola: COCCADRAFT_96026
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Entry
COCCADRAFT_96026 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
bze
Bipolaris zeicola
Pathway
bze03030
DNA replication
bze03410
Base excision repair
bze03420
Nucleotide excision repair
bze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCCADRAFT_96026
03410 Base excision repair
COCCADRAFT_96026
03420 Nucleotide excision repair
COCCADRAFT_96026
03430 Mismatch repair
COCCADRAFT_96026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bze03032
]
COCCADRAFT_96026
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_96026
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_96026
DNA replication proteins [BR:
bze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
COCCADRAFT_96026
DNA Replication Termination Factors
ELG1-RFC complex
COCCADRAFT_96026
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
COCCADRAFT_96026
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
COCCADRAFT_96026
Check point factors
HRAD17(Rad24)-RFC complex
COCCADRAFT_96026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Viral_helicase1
Gp44_lid
AAA_16
RCF1-5-like_lid
nSTAND3
RuvB_N
AAA_3
Rad17
Mg_chelatase
AAA_19
AAA_assoc_2
AAA_11
DNAX_ATPase_lid
MeaB
NTPase_1
AAA_24
NB-ARC
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
19154069
NCBI-ProteinID:
XP_007712250
JGI:
96026
UniProt:
W6Y125
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSKAESSKAAASNTVKPNPNAAGGANYELPWVEKYRPVYLDDVVGNTETIERLKIIAKDG
NMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKK
VTLPPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAI
LRYARLTDAQVVRRIMQICEAEDVKYSDDGIAALVFSAEGDMRQAINNLQSTFAGFGFVN
GDNVFKVVDSPHPIKVQSMIKACHEQRIDDALASLKELWDLGYSCHDIISTMFKVTKTID
TLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCVARLCKINMQPQLFALPTK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccgagtcgtcaaaggccgctgccagcaacactgtcaagcccaaccccaat
gctgctggaggtgcaaactacgagctgccatgggtagaaaagtaccgtcccgtctacctc
gacgatgtcgtcggcaacaccgagaccattgagcgcctcaagatcatcgcaaaagatggc
aacatgccacacatgatcatatccggcatgccaggtatcggcaaaacaacctccatcctc
tgcctcgcccgccaactcctcggcgacgcctacaaggaagccgtcctcgaactcaacgcc
tcagacgagcgtggcatcgatgtcgtccgcaaccgcatcaagggcttcgcccagaaaaaa
gtcaccctccccccgggcagacaaaagctcgttatcctcgacgaggcagacagcatgaca
agtggcgcccagcaagccctccgacgcaccatggaaatctacagcgcaactacccgcttc
gctttcgcctgcaaccagtccaacaagatcatcgagcccctccaatcccgctgcgccatc
ctccgctacgcccgcctcacagacgcccaggtcgtccgccgcatcatgcaaatctgcgag
gctgaagacgtcaagtactcggacgacggtatcgccgcacttgtgttttctgcagaggga
gatatgcgtcaggcaataaataatctgcaatcgacttttgccggctttggcttcgtcaac
ggcgataatgtcttcaaggtcgtggatagcccgcatcccatcaaggtgcaatcgatgatc
aaggcgtgccacgagcagcgtattgacgatgcgctggcgtcgctgaaggagctttgggat
ttagggtattcatgccatgatattattagtaccatgttcaaggttaccaagacgattgat
acgttgagtgagcatgcgaagctcgagtttatcaaggaaatcggcttcacacatatgcgc
atcctcgagggcgttcagacgctcctgcagctttctggctgcgttgcccgcttgtgcaag
attaatatgcagcctcaattatttgccctgcctaccaaatga
DBGET
integrated database retrieval system