Bipolaris zeicola: COCCADRAFT_96081
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Entry
COCCADRAFT_96081 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
bze
Bipolaris zeicola
Pathway
bze03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCCADRAFT_96081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_96081
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_96081
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
COCCADRAFT_96081
RNA polymerase I system
COCCADRAFT_96081
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
COCCADRAFT_96081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Acc5b_avian_CoV
Ig_TMEM132_5th
Motif
Other DBs
NCBI-GeneID:
19154077
NCBI-ProteinID:
XP_007712241
JGI:
96081
UniProt:
W6Y115
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MAGGAYIPPNQQRNMRACMVCSIVRTQQQFLSQGCPNCEEFLELTGNPEQINDCTSQVFE
GLITVADTTKSWVARYQRLEGYQPGVYATQVEGILPDDIIGLIESAGINYVPRDGSEQDM
LPKD
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggcgcgtacatccccccaaaccagcagcgcaacatgcgcgcctgcatggtc
tgctccattgtccgcacccagcagcagttcctgtcccagggctgccccaactgcgaggag
tttctcgagctcaccggcaacccggagcaaatcaacgactgtacctcgcaagtctttgaa
ggactcatcaccgtcgcagacaccaccaagagctgggtggccaggtaccagcgcctcgag
ggctaccagccgggtgtgtatgcgacccaggtcgaaggcatcctccccgatgacattatc
ggcttgatcgagagcgccggcatcaactacgtaccaagagatggcagcgagcaggatatg
cttcccaaggattaa
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integrated database retrieval system