KEGG   Bipolaris zeicola: COCCADRAFT_96081
Entry
COCCADRAFT_96081  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K15171  transcription elongation factor SPT4
Organism
bze  Bipolaris zeicola
Pathway
bze03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    COCCADRAFT_96081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bze03021]
    COCCADRAFT_96081
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_96081
Transcription machinery [BR:bze03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     COCCADRAFT_96081
  RNA polymerase I system
     COCCADRAFT_96081
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     COCCADRAFT_96081
SSDB
Motif
Pfam: Spt4 Acc5b_avian_CoV Ig_TMEM132_5th
Other DBs
NCBI-GeneID: 19154077
NCBI-ProteinID: XP_007712241
JGI: 96081
UniProt: W6Y115
LinkDB
Position
Unknown
AA seq 124 aa
MAGGAYIPPNQQRNMRACMVCSIVRTQQQFLSQGCPNCEEFLELTGNPEQINDCTSQVFE
GLITVADTTKSWVARYQRLEGYQPGVYATQVEGILPDDIIGLIESAGINYVPRDGSEQDM
LPKD
NT seq 375 nt   +upstreamnt  +downstreamnt
atggctggcggcgcgtacatccccccaaaccagcagcgcaacatgcgcgcctgcatggtc
tgctccattgtccgcacccagcagcagttcctgtcccagggctgccccaactgcgaggag
tttctcgagctcaccggcaacccggagcaaatcaacgactgtacctcgcaagtctttgaa
ggactcatcaccgtcgcagacaccaccaagagctgggtggccaggtaccagcgcctcgag
ggctaccagccgggtgtgtatgcgacccaggtcgaaggcatcctccccgatgacattatc
ggcttgatcgagagcgccggcatcaactacgtaccaagagatggcagcgagcaggatatg
cttcccaaggattaa

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