Bipolaris zeicola: COCCADRAFT_97404
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Entry
COCCADRAFT_97404 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_97404
Enzymes [BR:
bze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCCADRAFT_97404
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
90S particles
Helicases
COCCADRAFT_97404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Helicase_C_2
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
19154371
NCBI-ProteinID:
XP_007712770
JGI:
97404
UniProt:
W6Y4S4
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MAAPEITGRARPTKVKKRENVQKRKRDDVDVEKLEQAVQDLDPKQSSHKDFTDLPLSDPT
KQGLKSAHFAVMTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQHVGPD
AGLGALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTKMNILVATP
GRMLQHLSQTAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKERQTLLFSATQSK
KVSDLARLSLQDPEYVSVHAEDKSATPKGLTQNYIICPLEEKLDTLWSFIQASKKSKILC
FFSSAKTVRFVYESFRHMQPGIPLLHIHGRQKQGARLDTTAKFSSAKHSCLFATDVAARG
LDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGMLKRLEAKKVPI
EMINVRQKKRQSIKDQLQNMCFQDPALKYLGQKAFMTHVKSIYLQKDKEVFKLKEYNLEA
YAASLGLPGTPRIKFLKDDDSKQKKQASRQTIEISDSSDAEEVTKTDKPVRTKYDRMFER
KNQDVLAEHYQKLVRNEDEEAQADEFSGAGAATNGDDDFMAVKRRIPADDEPEDLNTDQD
PMLPVGGRVVHIAGASQPIVIDSHRREKLLQSKKKLTKLMDKGKKLVYDDEGNPHEVYEL
EDEEQFRAKGLPEEQRQKFIEAAREEVQNADIEDKATAKAKRKEKLRKRKERERAEMANA
DDDASDAGVVLPDPGEDLLANFRADAEYSDDDKDMSEEERQEEPPKKQKKWFQSDSEDEE
KVAKKRKKAKAAHRVEELETLEDMEALAAGLLN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccagaaattaccggtcgcgcaaggcctacaaaggtcaagaagcgtgagaat
gtccagaaacggaagcgcgacgatgtagatgtggagaagctggagcaggcagttcaggac
ctggaccccaagcaaagctcccacaaagacttcaccgacctgccgctctccgacccgacc
aaacaaggcctcaagtctgcacactttgccgttatgaccgacatccaggccaaggcgatt
ccgcttgcgctcaagggccacgacatactcggcgctgcgaagacgggaagcggaaagaca
ctttcctttatcatccccgttctggagaacctctaccggctgcaacacgttgggccagac
gcaggcctgggcgctttgattctgtccccgacccgagaacttgccatccagattttcgat
gtcctgcgcaagattggaagacatggccatatgtttgctgcaggtcttcttattggaggc
aagagtttgcaagctgagagggaggctctaactaaaatgaacatacttgtcgcaacacca
ggaagaatgctgcagcatctgtcgcagacagccgccttcaacgttgacgatctcaagatg
ctggtgctggatgaagcggataggattcttgatatgggttttcagcgggatgtggatgca
atcatcgagtatctgccaaaggagaggcaaacactgctcttctccgctactcagtctaag
aaggtgtcggaccttgcacgtttgagtctccaggaccccgagtacgtatcagttcatgcc
gaggacaagagcgcaacgccgaagggactcacgcaaaactacattatttgccctctggag
gagaagctggacactctgtggagtttcattcaggcgagcaagaagtccaagatcctttgc
ttcttctcgtctgccaagactgttcgatttgtctacgagtcctttcgtcatatgcagccc
ggtatcccactgttgcacatccatggtcgccagaagcaaggtgctcgattagacacaact
gccaagttttcctcagccaaacactcgtgtctctttgcaaccgacgttgctgctcgaggt
ctggatttccctgctgtcgacttcgtcattcaggtcgactgccctgatgatgtcgacacg
tatattcaccgagtcggtcgaacggcacgatacaaccgagaaggacgtggtgtgcttttc
ctagcacccagtgaagaagagggcatgctgaagcgtctggaagccaagaaagtgcccatc
gagatgatcaatgtgcgacaaaagaagcgccagtcaatcaaggatcagctgcagaacatg
tgcttccaggaccctgccttgaagtatctgggacaaaaggccttcatgacacatgtcaaa
tctatctatctacaaaaggataaggaggtcttcaagctgaaggaatataatctcgaagca
tacgcggcaagtctgggtctcccaggaacaccaaggatcaagttcttgaaggacgacgac
agcaagcagaagaaacaggcatcgaggcagactattgaaatctctgattcatcagatgct
gaagaagtcacgaagacagacaagcctgtgcggactaagtacgatcgcatgttcgagcgc
aagaaccaggatgttcttgcagagcattaccagaaacttgttaggaacgaagacgaggag
gcgcaggcagacgagtttagtggggctggagcggcgaccaacggagacgacgatttcatg
gctgttaaacgacggattccagcagatgacgaacccgaggacctcaataccgaccaggac
cccatgcttcctgtgggcggtcgtgttgtccacattgctggcgcatcgcaacccattgtt
attgacagccatcgccgagagaaacttcttcaatccaagaagaagcttaccaagctcatg
gacaaaggcaagaagctcgtctacgacgatgaaggaaacccacacgaagtttacgaactc
gaagacgaagagcaattccgcgccaaaggtttgccagaagagcaacgacagaagttcatc
gaagccgcacgtgaagaagttcaaaatgccgatatcgaagacaaagctaccgccaaggca
aagaggaaagaaaagttgcggaaacgcaaagagagggaaagagctgagatggctaatgct
gacgacgatgcaagcgatgcaggcgtggtacttccagatcccggcgaagacctcttggca
aactttagggcagatgcagagtatagtgatgacgataaggacatgtcagaggaggaacga
caagaggagccacccaagaagcagaagaagtggttccagtctgactctgaggacgaagaa
aaggtcgcaaagaagaggaagaaggcaaaggccgcgcacagagtcgaggagctcgagacg
ttggaggatatggaggcgcttgctgccggcttgctaaactga
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integrated database retrieval system
