Bipolaris zeicola: COCCADRAFT_97942
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Entry
COCCADRAFT_97942 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_97942
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
COCCADRAFT_97942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
DUF6448
VitD-bind_III
Motif
Other DBs
NCBI-GeneID:
19154476
NCBI-ProteinID:
XP_007712961
JGI:
97942
UniProt:
W6Y4G9
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MDFMIKEWTVLLDRCLERRVQSDVFAAAVAQLHAKSPLPGRKLASLFLRPRVADNTNIDP
RTVIYLEQLLSLKKLDASDVLIVALLYSKVRLPIKTEEKPSKDVKWSNPPELEELVFHRL
HKVFAAEERPVNNVEAVHTLAVVARWMQAMVTSHTSDTMIQAMAGIQQPQQQSINVREGL
AMLVVGVIENSKILRILNHPKAEEVRKELTKSLSSFIPFLSNNSAGSQTSLSLANRLEIS
QKQHDLYEKLPNVNGEGNESAGLEVAALQLDAVMELPQANTRAGLYVFLNSLLVARPLTD
DFVIISHLHTRYKLEPQNMATDLITAAFDILANAMYRNEPTQTLFYLKSFLINKIPTILT
QISGSIFPMTVEMCITQALSHVDPNAFPSFSQGFDDIMGSNNSLSDVRQDYLNACVLHGL
LPAGTVERLLGEAPMQGPPAKRYERKELLNQCKSNFDKVSVYIDELENLDGNAGAIVAAV
ADFISHLCDTQTTMYLKQLCCLIFKKPQAMDVMLQFTSPASILRPLCQFLEDWHYDSDQG
EYQPVYDEFGAILVLIMAFVYRYDLVYHDIGISHDTFIAKLLQRGHHSIPPDELTEEQGR
HLGSWLKGLYDSDKEGLSNEVFASCRPQDFYLIVPTLFHQTVVACSLGVLSFETVKGGLE
YLGETFLMPSLIGGLTWMASYALLQTHNDLDAMTRIFNAILLSAPSSGDAQAMHLTIIAM
VSSRLEKCFRTLQRREPNRNNLDSFLQAIKMHAHYERTVFATMKELDQWTNAPNSTLNTS
LRHTVQQLSQWASTASMQPNPPSYTHRQLYASLKMLGAARTLRAIVDEVKTQTDGGNGAA
ALDVGVSIICSPTVEDSPISVDWVGSTVPAPTPQRTRMNLREMLKQDFDDAASLVATDPL
TAETIVRLHRRVEAHFTSLAESGLQAPPISIPSVNIADMQSQSISEHLNRAMDDAAAASM
VEDISNMDNKALQRSMDELANTEGLDLSGIGMGNGDAGTGDMSTDLGNLPDLDLGDMGGM
GIDMDMNMDMGGGGGGDDDWGLDFDNM
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatgatcaaggaatggacggtccttttggaccgctgtttggagcgccgcgtc
caatctgatgttttcgctgccgcagtcgcgcagctacacgccaagtctccactgccaggc
cggaaactcgcctctctgtttcttcgcccacgcgtcgcagataacaccaatatcgaccca
cgcactgtaatttacctcgagcaactgttgtcgctgaagaagcttgacgcttccgacgtt
ttgattgtcgcgcttctgtactccaaagttcgactaccaatcaagacagaagagaagccc
tcaaaagatgtgaaatggagcaacccaccagaattggaagaactcgtttttcatcgtttg
cacaaggtctttgctgcagaggaacgccccgtcaacaatgtcgaggctgtgcacacccta
gctgttgtagcacgatggatgcaggcaatggtcacctcgcataccagcgataccatgatt
caggccatggctggcatacaacagccacaacagcagtccattaacgtgcgagaaggcctc
gctatgctcgtggttggggtaatcgaaaattcaaaaatcctccgaatactgaaccaccca
aaagctgaagaggtgcgcaaggaactgacaaaatctctctcatcatttatcccatttctc
tcaaacaactcggcggggtctcagacatctctgtcgctagcaaacaggctagagatctcg
caaaaacaacacgatttgtacgaaaagcttccaaacgtcaatggcgagggaaatgagagc
gccggtcttgaagttgctgcgcttcagcttgatgcagtaatggagctaccgcaggcgaat
acgcgagctggtctctacgtatttctgaattcgttactcgttgcacgaccactaactgat
gactttgttatcattagccacttacatacgcgttacaagctagaacctcagaacatggca
actgatctaatcacggctgctttcgacattctcgccaacgccatgtaccgcaatgagcct
actcagaccttgttctacctgaagtcttttttgatcaacaagattcctactattctgacg
cagatttccggctcaatatttccaatgacagttgagatgtgcattacccaggcgctgagt
cacgtggatccaaacgcttttccgtctttctcacaagggtttgacgatattatggggagc
aacaactctctttcagatgtcagacaggattatctcaacgcctgtgtgcttcatggtctc
cttccagcgggtactgtagagcgcctcttgggggaagcacctatgcaaggaccacccgcg
aagagatacgagaggaaggaattgcttaatcagtgtaaatccaacttcgacaaggtcagc
gtatacattgatgaacttgagaatcttgatggaaatgctggcgctattgttgcagctgtg
gcagacttcatttcacatctttgcgatacacaaacgaccatgtatctaaagcagctttgt
tgtttgattttcaagaaaccccaagcaatggatgtgatgctacagttcacgtccccagcg
agcatactacgaccgttgtgccagtttctcgaggactggcattatgatagcgatcaaggc
gaataccaacccgtatacgacgagtttggtgctatacttgttctcatcatggcttttgta
taccgctatgatctggtgtaccatgacatcggcattagtcacgatacattcatcgcgaag
ctattgcagcgtggacatcacagcataccaccagatgaattgaccgaagaacagggcagg
catcttggaagctggctcaaaggtctctatgactcggacaaggaaggtttgagtaatgaa
gtcttcgcgtcgtgtcggccgcaagacttttacttgattgtaccaacccttttccatcag
acagtggtggcttgctccctcggtgttttgtctttcgaaaccgtcaaaggtggtctagaa
tatttgggtgaaacatttctcatgccgtcgctaatcggaggtttgacctggatggcttcc
tatgccctactacagacccacaacgacctggacgcaatgacacgcattttcaacgcgatt
ttactctccgcaccatcatctggagacgcacaggctatgcacttgactatcatagccatg
gtgtcaagtcgcctggagaagtgctttcgtacactacagcgacgagaaccgaatcgcaac
aacctcgactcctttttgcaggccatcaaaatgcacgcacattatgaacgtaccgtgttc
gccacaatgaaggagctggatcaatggacgaatgcacctaacagcacattgaatacttca
ctgcgacacactgtgcaacagctctcacaatgggcttcaacagcttcgatgcaaccgaac
ccgccaagctatacacaccgtcaactatacgcttcgctgaagatgctgggtgcggcccgg
acattacgggctattgtagacgaagtgaagacgcagactgatggtggcaacggagcagcg
gcacttgacgttggggtatccattatctgttctccaactgttgaggacagccccatttcg
gtagactgggtgggaagcacagtaccagcgcccacaccgcagcgaacgcgtatgaaccta
cgagagatgctgaagcaggatttcgacgatgcagccagcctagtcgctaccgatcccctg
accgcggagacaatagtgcgcttacaccggcgcgtcgaagcacactttacatcactagcg
gagagcggacttcaagcacctccaatcagcataccaagcgtcaacattgcagacatgcaa
tcgcaatctatttccgagcacctgaaccgtgccatggacgacgcagcagcagcgagcatg
gtcgaggatatttccaatatggataacaaggctctccagcgcagcatggacgagcttgcc
aacactgaggggctggatctgtcgggcatcggtatgggcaatggtgatgcaggaactggt
gatatgagcacggatctgggtaacttaccggacttggacctaggtgatatgggaggcatg
ggtatagacatggacatgaacatggacatgggtggaggcggaggaggtgatgatgactgg
ggacttgatttcgacaacatgtag
DBGET
integrated database retrieval system