Bipolaris zeicola: COCCADRAFT_98522
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Entry
COCCADRAFT_98522 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_98522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_98522
Spliceosome [BR:
bze03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
COCCADRAFT_98522
Complex B
COCCADRAFT_98522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
TRIP4_3rd
Motif
Other DBs
NCBI-GeneID:
19154596
NCBI-ProteinID:
XP_007713183
JGI:
98522
UniProt:
W6XYI5
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MTHLLPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVPTD
SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGVTSDDLER
EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV
LVDVERGRTVSGWRPRRFGGGLGGRGYTKGPAARGSGGAGGFGGAPAGPGGFGGRGGGFN
SGFGGRGGGRGGFGGDRGGFRGGSGGFGGGGRGGGGGYGGGRGGIGYQSNGYGPPDGAPA
GPRGPRSGGFGGDRGSGGYGGDPVLTMNRSAAGIDTATVTVDMVEAETMARGSALTMVTA
TTTHEHDEGTKLDLRLSPVAQWFVKKVTSLFFAPAFLVNEGKIDSVQLLTFRLYSTAQYR
RVRSTQHQKTITPRHHCIS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacacatttactcccgccgatgctgttgaacctcttcgccccgcggccgccgctgcga
tgggttgagcctactgaccacgcgccagagaagcgttgcacccccaaaattggcggcatt
gcgcaatacatggacgccctacgcgaatacaaggacaacgatggctatgtgcccaccgac
agctggctgcagaaacgcgatcgcaagaagctcgaaaagaaggagaaacaggagaagctt
attactgaaggcgtcaagaattacaaaccctccgaggatccaaaggtacagggcgacgcc
ttcaaaacactcttcgtgtctcgcctgtcgtacggcgtcacctctgacgacctcgagcgc
gagtttggtcgttacggtcccattgagcgtatccgcatcgtcgaggacatcacgcagcca
gaagacgcgccacctaagaagcgcaagcgcggctatgccttcattgtgtttgagcgtgaa
aaagacatgaaggcagcctacaaagagacagatggcatcaaaatcaaggaccgacgtgtt
ctggtcgatgttgagcgcggtcgcacggtttctggctggcgtccacgccgctttggtggt
ggccttggcggtcgaggctatacaaagggaccagctgcccgcggatctggtggcgcagga
ggctttggcggcgcccctgccggtcctggtggattcggaggtcgcggcggtggcttcaac
agtggtttcggtggacgaggtggaggtcgcggaggctttggcggtgatcgaggaggtttc
cgtggtggaagtggaggctttggtggcggcggccgaggcggcggcgggggttacggcggt
ggacgaggaggtatcgggtaccaatcgaacggttatgggcctcccgatggtgcacccgct
ggtcctcgtggtccccgaagcggcggtttcggtggcgaccgaggaagcggtggttacgga
ggcgatccggtgctaacaatgaaccgctcggcagcagggatcgataccgcgaccgtgacg
gtggatatggtggaggccgagacgatggctcgcggaagcgcgcttacgatggtgacagct
acgacgacccacgaacacgacgaaggtactaagctcgacttacggctaagccctgttgcg
caatggtttgtcaaaaaggttacctcccttttcttcgccccagcctttctcgtcaacgag
ggtaagatcgactctgttcagctcttgacgtttcgactctacagcacagcgcaatatagg
agggtaaggagcacgcaacaccaaaaaacaatcactcctaggcaccattgcatatcttga
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