Bipolaris zeicola: COCCADRAFT_98760
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Entry
COCCADRAFT_98760 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_98760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_98760
Spliceosome [BR:
bze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
COCCADRAFT_98760
Complex C
U5 SnRNP specific factors
COCCADRAFT_98760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Hom_end_hint
Hom_end
Motif
Other DBs
NCBI-GeneID:
19154654
NCBI-ProteinID:
XP_007713279
JGI:
98760
UniProt:
W6Y413
LinkDB
All DBs
Position
Unknown
AA seq
2922 aa
AA seq
DB search
MDFPPPPPPPPPPGPPPPGPPGSGYAPPPPPPPPPGAPGTVGPGTVGPPGMRPPVDPQIT
KFAQKKKDWLRQQRQRFGEKRKAGFVETQKADLPPEHLRKVFRDIGDVSQKKFTSDKRSY
LGALKFMPHAVLKLLENMPMPWESRRDVKVLYHTNGCLTLVNEVPRVIEPVFHAQWAAMW
LAMRKEKSDRRHFKRMRFPPFDDEEPPLSYSENIEDVEPLEPIQLELDEDEDSPVYEWFY
DHRPLLDTPHVNGPSYETWNLDLPQMATLYRLSKQLLSEVVDKNYFHMFDLDSFQTAKAL
NVAIPGGPRFEPLYKDIDPNDEDFGEFNAIDRIIFRSPIRTEYRVSYPYLYNSLPRSVKL
AWYSYPQVVYVRAEDPDLPAFYFDPVINPISSRAVAPKNLSVSHEDMVFGDADEDDEDDF
QMPEDVEPFMADEDLSTPDTASAIALWWAPHPFDKRSGRMVRAQDVPLVKQWYLEHVPAD
QPVKVRVSYQKLLKTYVLNELHKKPPQAQNKQNLMRTLKSTKFFQQTKIDWVEAGLQVCR
QGYNMLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIV
DAQVQYRLGNIDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNS
GPVGKGPGCGFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVE
SHFDLELRAAVMSDLMDMMPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENI
ILRYVKSKADWWISVAHYNRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYMKDG
PYVSSEEAVAIYTTMVHWLEARKFQPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQ
SQREELALIEQAYDSPGTTLARIKRFLLTQRAFKEVGIDMNDNYSSINPVYDIEPMEKIT
DAYLDQYLWYQADQRHLFPAWIKPSDSEVPPLLTYKWAQGINNLDQVWETKDGECNVMIE
TQLSKVYEKIDLTMLNRLLRLIMDHNLADYITAKNNVQLNYKDMNHVNAYGMIRGLQFSG
FVFQYYGLVLDILLLGLQRANEIAGAPESPNDFLQFKDKETEVRHPIRLYTRYIDRIWVF
FRFTAEESRDLIQRFLTENPDPNFENVIGYKNKKCWPRDSRMRLMRHDVNLGRAVFWDLK
NRLPRSVTTIEWDDTFASVYSRDNPNLLFSMNGFEVRILPKIRNLTGEFPVKDSVWSLVD
NSTKERTADAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTTLIALFTYYREAA
VSTVNLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTS
DKRWSKQTDTGVTHYRAGMSHDEETLIPNIFRYIIPWESEFVDSQRVWMEYSQKRQEAQQ
QNRRLTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRARTEFKIYQHMKSNPFWWTSQ
RHDGKLWNLNQYRSDCIQALGGVETILEHTLFKATAFPSWEGLFWEKACLANGTRLLRYD
GSEVLVEDVKEGDLLLGPDGTSRRAFNIVNGTEQLYRIKVGGKKEDFVVTKNHILVLHLE
KKSGNEYQGMSMKDHHGSCIQDSEDEEEDPLFLDMEKPEVSASERYDVVEMTAEEFAALE
PNVQAKYRVFRCPGFELPEENVPVHPYFLGLWLGDGNRNSTTIYNEHEAEVRDFLVSYAA
ELDLHLVWHGQLGYATVGRTRLADRPFPTKNKGKGPVNSETRKSRQTINKTRLAAGWSFQ
ENRQPGEARLWPDADEVCKDVLYKNEILICSQDQELDEDLDLIEIESEDEEEEEEEEEEE
KGSDDIQFLNEDLGRHPSRFERHRIARLEAGRSTYGRLRPEEEAELINDLVEYDENDDGV
NSLRTALQGLGVMSGGATGPGADRKHIPSVYLRNCRAVRLAVLAGLIDSDGWLVYPENFI
GFSQSERWHKALFWDTVALARSLGFGVWTTKRDMWNPTRTQKNPQLVAQIFGNISEIPCL
LARKKGCERYIPQMHSFMIKEIALESTPTAWSGFRVDKDQLYLRHDYMVLHNSGFEESMK
FKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLI
QIFRAHLWQKIHESVVMDLCQVFDQELEALGIETVQKETIHPRKSYKMNSSCADILLFAS
HKWSVSPPSMLYDTKDTMSATTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTQDSMSI
YPSATGLMIGIDLAYNLYSAYGQYFPGLKQLVQQAMAKIMKANPALYVLRERIRKGLQLY
ASESSQEFLNSQNYSELFSNQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRT
GQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEV
HLLDFPNISIRASELQLPFQAAMKVEKLGDMILRATGPQMVLFNLYDEWLKTISSYTAFS
RLILILRALHVNQDKTKLLLRPDKTVITQEHHIWPSLTDEDWIKVEVQLRDLILLDYGKK
NNVNTSSLTSSEVRDIILGMEISAPSMQRQQAAEIDKQQEEQQQLTAVTTKTQNIHGEEM
VVTTTSQYEQASFASKTEWRTRAVATSNLRTRANNIYINSEDVKEEGHFTYVMPKNVLKR
FITIADLRVQVAGYLYGKSPPDNDQVKEICTIVMIPQVGNTRDVQLPKELPRHEYLDNLE
PLGIIHTVSGNEPPYMQASDVTQHARLMNQHASWDKKTVSMTVSFTPGSVSLAAWALTPN
GYKWGAENKDTMSDNPAGFSTSFGEKCQLLLSNKIRGYFLVPDNGIWNYSFMGSAFGSVE
KKPVHVRLDTPVRFYDPVHRPLHFHNFAELEDVWVDRENQFE
NT seq
8769 nt
NT seq
+upstream
nt +downstream
nt
atggatttccctccgccccctccaccacctcctccaccgggccctcctcccccaggccct
ccaggttctggatatgcgccgccacctccgccgccgccacctccaggcgcacctggtacc
gtcggacctggtaccgtcggacctccgggtatgcgcccaccagtcgacccacaaatcacc
aagtttgcccagaagaagaaggactggttaagacagcagcgtcaaaggttcggcgaaaag
cgcaaggctggctttgtggagacgcagaaggcggatctccccccagaacatttgcgcaag
gtcttcagggatattggtgatgtatctcagaagaagttcacttcagacaagcgaagctat
ctcggtgcgctaaagttcatgccacatgctgttctgaagctcctcgagaacatgcccatg
ccctgggagagtagacgtgatgtaaaagtcctctaccacaccaatgggtgcttgacgctg
gtgaatgaagttccccgtgtgattgagcccgtattccacgcgcaatgggctgccatgtgg
ttggctatgagaaaggagaagagtgaccgccgacatttcaagcgaatgcgtttcccaccc
tttgacgatgaagagcctcctctgtcgtactcggagaacattgaggatgtggagcctttg
gaacccatccagttggaactcgacgaggacgaggatagccctgtgtatgaatggttctat
gaccaccggccgcttctcgacactccacatgtgaatggtcctagttacgagacttggaat
ctggatctccctcagatggcgactctatatcgcttaagcaaacagcttctcagcgaagtt
gttgacaagaactactttcacatgtttgatctagacagcttccagactgcaaaggccctg
aatgttgcgatacccggaggccctcgctttgagcccctgtataaggatattgatccgaat
gacgaggactttggcgagttcaacgcaatcgaccgtatcatcttccgatcccccatccga
accgaataccgtgtatcatacccatacctttacaactcgctacctcgaagtgtcaagctg
gcttggtactcgtatccgcaggttgtctacgtccgcgcagaagatccggatctaccagcc
ttctacttcgatcctgtaatcaaccctatttcttccagagctgttgctccgaagaacttg
tccgtaagccacgaggatatggtttttggggatgccgacgaggacgacgaggacgatttc
cagatgcccgaagacgtggagccattcatggctgatgaggatctttctacaccagatact
gcttccgccattgcgctttggtgggcacctcatccgtttgacaagcgatcaggtcgcatg
gtcagagcgcaggatgttcccctggtcaagcaatggtacctcgaacacgtacctgcagac
cagccagtcaaagtcagggtctcctaccagaagttgctgaagacatatgttctcaacgaa
ctgcacaagaaaccacctcaagcacaaaacaagcaaaaccttatgaggacattgaagagc
accaagttcttccaacagaccaagattgactgggtcgaggccggtctgcaggtgtgccgc
cagggttacaacatgctgaacctgctcatccaccggaagaacttgacttatctgcatctc
gactacaactttaacttgaagccggtcaagactcttaccaccaaggagcgaaagaagtca
cgtttcggaaatgctttccatctgatgcgtgaaatcttgagattgacgaagctcattgtt
gatgctcaggtgcaatatcgtctaggcaacattgacgcctttcagcttgccgatggcatc
ctgtatgcctttaaccacgttggtcaactgaccggtatgtaccgttacaagtataagctc
atgcatcagattcgatcctgcaaggacctgaagcatttgatctactaccgattcaactct
ggcccagtgggtaagggtcctggatgtggtttctgggctcctgcctggagagtttggttg
ttcttcatgcgaggtatcatccctctgcttgagcgctggctaggcaacttgctttcacgt
cagtttgaaggcagacacagcaagggtgtcgcaaagactgtcaccaagcaacgagtagaa
tcacactttgatctcgagcttcgtgcagccgtcatgagcgatctcatggacatgatgcct
gaaggaattaagcagaacaaggtcaacaccgtcttgcagcatctttcggaagcatggcgt
tgctggaagagtaacattccctggaaggttcctggtttgccagcgcctatcgaaaacatc
atcttgcgctatgtcaagagcaaggctgattggtggatctcagtcgcccattacaatcgt
gagcgcattcgacgaggtgcaactgttgacaagactgttgctaagaagaacctgggacga
ttgactcgtctgtggctcaaggccgaacaggagcgccagcacaactacatgaaggatggt
ccttatgtttcgtccgaggaggctgttgccatttacacgaccatggtacattggctcgaa
gccagaaagttccaaccgattcctttccccagcgtctcatacaaacacgacaccaagatt
ctgattctagcgttggagcgtttgagggaagcttactctgtcaagggtcgtctcaatcag
agccagcgtgaagagttggcgctcatcgagcaggcatatgactctcctggaacaacactg
gctaggatcaagcgcttcctgcttacgcaacgtgcgttcaaggaagttggtatcgatatg
aacgacaactacagcagcatcaaccctgtatacgacattgagccaatggagaaaatcacg
gatgcatatcttgatcaatacttgtggtaccaagccgatcagcgacacctgttcccggct
tggatcaagccttcagactctgaagttccccctctcttgacatacaaatgggcacagggt
atcaacaatcttgatcaagtctgggagaccaaggatggcgaatgcaacgtcatgatcgaa
actcagctatcgaaggtctacgagaagattgatttgacaatgctcaaccgattgttgcgc
ctcatcatggaccacaacctggcagactacatcacagccaagaacaacgtacagctcaac
tacaaggatatgaaccacgtcaacgcttatggtatgattcgtggcctacagttctctgga
ttcgtgttccagtactatggtcttgtcttggatattctgctgttgggcttgcagcgtgcg
aatgagatcgctggcgctcctgagagtcctaacgacttcttgcagttcaaggacaaggag
actgaggtccgccaccccattcgtctctacacaaggtacattgaccgcatctgggtcttc
tttaggttcaccgccgaggagtcgcgagacttgatccagcgattcttgactgagaacccc
gatcccaactttgagaatgtcatcggctacaagaacaagaagtgctggccgcgtgattcc
aggatgcgattgatgcgccacgatgtgaaccttggtcgcgccgtcttctgggatctcaag
aaccgactgccgcggtcagttacgaccattgaatgggatgacacctttgccagtgtctac
agtcgcgacaaccccaacctgctcttttccatgaatggtttcgaagtccgcatccttccc
aagatccgaaacttgactggtgaattccccgtcaaggacagtgtctggtcgcttgtcgac
aattccacgaaagaacgcaccgccgacgcctttttgcaagtcacagaggaagacatccag
aagttcaacaaccgcatccgacagattctgatgtcttcaggatccaccacctttacgaag
attgctaacaagtggaacacaacgcttattgcgctctttacgtactaccgtgaagctgca
gtatcaactgtcaacttgctcgacaccattgtcaagtgcgagaccaagatccagactcgt
gttaagattggattaaactcgaagatgccatcgcgtttccctcctgcagtgttttacacg
cccaaggagttgggtggtttgggcatgatatctggctcacacattctcattccgacaagt
gacaagcgatggtccaagcagaccgatactggagtcacgcactaccgtgcaggtatgtct
cacgacgaagagacgctcattccaaacatcttccgatacatcattccgtgggaatcagag
ttcgttgactcgcagcgcgtctggatggaatactcacagaagcgtcaagaagcacaacaa
caaaaccgacgactgactcttgaggatttggaagacagctgggaccgtggtctccctcgt
atcaacacgttgttccaaaaagatcgtagtacgctcagtttcgacaagggtttccgcgcc
aggaccgaattcaagatctaccagcacatgaagagcaatcctttctggtggacgagccaa
agacacgatggaaaactgtggaatttgaatcagtaccgttcggactgtatccaagcgttg
ggtggtgtggaaaccattttggaacacacactcttcaaggcaactgcttttccatcatgg
gagggcctcttttgggagaaagcttgtcttgctaatggcacgagacttcttcggtatgat
ggttccgaagtcctggtcgaggatgttaaggagggggatctattgttgggtccggatgga
acttctcgtcgtgctttcaacattgtcaatggcaccgaacaactgtatcgcatcaaggtt
ggaggaaagaaggaagattttgtggtcaccaagaatcacatcctggttctccatttagag
aagaagtctgggaatgagtaccagggtatgagtatgaaagatcaccacggcagctgcatt
caggattctgaagacgaggaagaagatcctttgttcctggatatggaaaagcctgaagtt
tcagcatctgagcgttatgatgttgttgaaatgactgccgaggaatttgctgctttggaa
cccaacgtacaggcgaagtatagggtgttccgatgtcccggatttgagctccctgaagaa
aatgtaccggtccatccctatttcctcggactctggctgggtgatggcaaccggaacagt
actactatctacaacgaacatgaggctgaagttcgtgacttcctggtctcctatgcggct
gagctagatcttcacctcgtttggcatgggcagttaggctatgctaccgtgggccggact
cgccttgctgaccgtccttttccaacaaagaacaaggggaaaggccctgtaaattcggaa
acccggaaatctcgccagaccatcaacaagacgcgtcttgctgctggttggtctttccaa
gaaaatcgtcaacctggtgaggccaggctttggcctgatgcagatgaggtatgtaaagac
gttctctacaaaaatgaaattctaatatgttcgcaggaccaggaactagacgaggacctc
gacctgattgagattgaaagtgaggacgaagaagaagaggaggaggaggaggaggaggaa
aaaggcagtgatgatatccagttcctcaacgaggatcttggacgccatccatcccggttt
gaacgtcaccgtattgcacgtttagaagctggtcgcagtacctatggtcgactccgtcct
gaggaagaagccgaactcatcaacgatcttgttgagtatgacgaaaacgacgatggtgtc
aacagccttcgaaccgcacttcaggggcttggggttatgtctggcggtgcaactggtccc
ggggccgatcgaaaacatatcccatcagtataccttaggaactgccgagcagttcgcctg
gctgttcttgccggtttgattgacagcgatggatggctggtttaccctgaaaacttcata
ggcttcagccagagcgaacgatggcataaagcacttttctgggatactgtggccttagca
cgatctttgggctttggtgtctggactactaaacgggatatgtggaatccgactcgaact
cagaagaatcctcaactggtcgctcaaattttcgggaacatttccgagataccatgcctt
cttgcacgaaaaaaggggtgcgaacgctacattccccaaatgcacagcttcatgatcaag
gaaattgccctggaatctactcctactgcttggtccggcttccgagttgacaaggatcaa
ctttacctacgacacgactacatggtacttcataacagtggttttgaagaatctatgaag
tttaaaaagctcacaaacgctcagcgttctggtttgaatcagattccaaaccgtcgcttc
actttgtggtggtcacccaccataaaccgcgcaaacgtctacgtaggtttccaggtgcaa
cttgatcttacgggcatcttcttgcacggtaagattcctactcttaagatatcgctcatc
caaatcttccgagcccatttgtggcagaagattcacgaatcggttgttatggatttgtgc
caagtctttgatcaggagcttgaggctcttggcatcgagacagtgcaaaaggagacgatc
catcctcgtaaatcgtacaagatgaacagctcctgtgccgatatcctactttttgcgagc
cacaagtggagtgtttctccaccctccatgttgtacgataccaaggacactatgagcgcg
acgactaccaacaagttttggattgacgttcagctacgatatggtgactacgattcgcac
gacattgaacgatatgtgcgcgcaaagtacctcgactatacccaagacagcatgagtatc
tacccttctgcaactggtctcatgatcggtattgatttggcatacaatctctactctgcc
tacggacagtacttccctggactcaagcagctcgttcagcaagcgatggccaagatcatg
aaggccaacccagctctctatgttctccgagagcgtatcaggaagggtctccagttatat
gcttcggaaagttctcaggaattcctcaactctcagaactactcggagctgttcagcaat
cagatccagctgttcattgatgatacgaacgtgtatcgtgtgacaatccacaagactttc
gagggtaacttgacgactaagcccatcaacggcgccatcttcatcttcaaccctcgtact
ggtcaactgttcttgaagataattcacacaagtgtttgggctggtcagaagcgtctcggt
cagttggccaaatggaagactgccgaagaagtggcagctctcattcggtcactgcctgtt
gaagaacaaccgaagcagctgattgtcacccgtaagggtttgctcgatcctctggaagtg
cacttgcttgacttccccaacatctctattcgggcatcagagctgcagctgccattccaa
gctgctatgaaggtggagaaactcggtgacatgatcttacgagccactggacctcagatg
gttctcttcaacctgtacgatgaatggttgaagacgatttcatcatacactgctttctcg
agattgatcttgatcctccgcgcgcttcatgtcaaccaggacaagaccaagctgctcttg
cgacctgacaagacggtcatcacccaggagcatcacatctggccttcactaacggacgag
gactggatcaaagttgaagtgcaacttcgtgatctcatcctgctcgactacggcaagaag
aacaatgtcaacacttcgtcactcaccagcagtgaagtgcgtgatatcattttgggtatg
gagatttcagcgccatcgatgcaacgtcaacaagctgccgagatcgacaagcagcaggag
gagcagcagcaattgactgccgtcaccacgaagacgcagaacatccacggcgaggagatg
gttgttacaacaacttcgcagtatgaacaggcttccttcgcctccaagacagaatggcgt
accagggctgttgccacgtccaacctgcgtactcgtgccaacaacatctacatcaactct
gaagatgtcaaggaggaaggccacttcacctatgtcatgccaaagaacgtactcaagcga
ttcatcaccattgccgatcttcgcgttcaagttgcgggctacctctatggcaagtcgcca
ccagacaatgatcaggtgaaggagatttgcaccattgtcatgatccctcaagttggtaac
acacgtgacgtgcagctgccaaaggagctgccgaggcacgagtatctcgacaatctagag
ccgctgggaattatccacaccgtcagcggaaatgagccgccgtacatgcaggctagcgat
gttacccagcatgctcgtctgatgaaccagcacgctagctgggataagaagactgtttcc
atgaccgtgtcctttacccccggttccgtctccctcgccgcctgggcccttacacccaac
ggctacaagtggggcgctgagaacaaggatactatgtccgacaaccccgccggcttcagc
acaagcttcggtgagaagtgtcagttgctactgtctaacaagattcgcggatacttcttg
gttcctgacaatggcatctggaactacagcttcatgggcagtgcatttggttctgtcgag
aagaagcccgtgcatgtgcgtcttgatacccccgttcgcttctacgaccccgtgcacagg
ccgctgcatttccataactttgcggagctggaggatgtttgggttgatcgggagaaccag
tttgagtag
DBGET
integrated database retrieval system
