KEGG   Bipolaris zeicola: COCCADRAFT_99525
Entry
COCCADRAFT_99525  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
bze  Bipolaris zeicola
Pathway
bze03040  Spliceosome
bze04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCCADRAFT_99525
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    COCCADRAFT_99525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_99525
   03041 Spliceosome [BR:bze03041]
    COCCADRAFT_99525
   03032 DNA replication proteins [BR:bze03032]
    COCCADRAFT_99525
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     COCCADRAFT_99525
Spliceosome [BR:bze03041]
 Complex A
  U1 snRNP components
   Sm proteins
    COCCADRAFT_99525
  U2 snRNP components
    COCCADRAFT_99525
 Complex B
  U1 snRNP components
    COCCADRAFT_99525
  U4/U6.U5 tri-snRNP components
    COCCADRAFT_99525
 Complex C
  U2 snRNP components
    COCCADRAFT_99525
DNA replication proteins [BR:bze03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     COCCADRAFT_99525
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 19154825
NCBI-ProteinID: XP_007713563
JGI: 99525
UniProt: W6Y9K5
LinkDB
Position
Unknown
AA seq 116 aa
MTSTIGIPIKLLNEAAGHIVTLEITSGEVYRGKLIEAEDNMNVQLKDITVTARDGRVSHL
EQVYIRGSHVRYFIVPDMLRNAPMFRSRGTRGRGVGLARGRATVNRARASTRGGGR
NT seq 351 nt   +upstreamnt  +downstreamnt
atgacgagcactatcggtatcccaatcaagcttctcaatgaggcagcgggccacattgtc
acgctcgaaatcacatccggcgaagtctaccgtggcaagctgattgaagctgaggacaac
atgaacgtgcagctaaaggacattactgtgaccgcccgcgatggtcgtgtctcacatctt
gagcaagtctacatccggggaagccatgtacgatactttattgtacccgacatgttgagg
aacgcgcccatgttccgatcgagaggtacgaggggtcgcggtgttggtcttgcacgtggc
agggccacagtgaacagggcaagggctagcactcgaggtggtggacgttga

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