Bacteroides zoogleoformans: C4H11_00875
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Entry
C4H11_00875 CDS
T05371
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg03420
Nucleotide excision repair
bzg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4H11_00875
03430 Mismatch repair
C4H11_00875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_00875
Enzymes [BR:
bzg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4H11_00875
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4H11_00875
MMR (mismatch excision repair)
Other MMR factors
C4H11_00875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AVM51702
LinkDB
All DBs
Position
complement(192068..194380)
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AA seq
770 aa
AA seq
DB search
MPDYIQELNEGQRAAVLYNDGPSLVIAGAGSGKTRVLTYKITYLLENGYRPWDILALTFT
NKAAREMKERIARQVGTDRARHLWMGTFHSMFLRILHAEAMHLGFTSQFTIYDTADGKSL
IRSIIKEMGLDEKIYKPGLVQARISNAKNHLVSPAAYANSKEAYEADRAAKVPALRDVYQ
RYWERCKQADAMDFDDLLFYTFLLFRDQPEILARYQEQFRYILVDEYQDTNFAQHSIVLQ
LSKNHQRVCVVGDDAQSIYSFRGADIDNILYFTQIYPNAKVFKLEQNYRSTQTIVCAANS
LIKKNHRQIRKEVFSEKEKGEALGVYQAYSDVEEGDIVVNKITELRREKQYAYSDFAILY
RTNAQSRIFEEVMRKRGMPYRIYGGLSFYQRKEIKDIISYFRLIVNPNDEEAFKRIINYP
ARGIGDTTVGKIIAAATMHNVSLWTVLCDPPAYGLTFTKSTAGKLQGFQDLIAGFIAYAA
DKNAYEIGSDIIRRSSIINDICQDNSPENLSRKENIEELVNGMSDFCVRRQEEGNPDILL
ADFLSEVSLLTDQDSDKNDDDDEKITLMTVHSAKGLEFKNVFVVGMEENLFPSAMIGESV
RALEEERRLFYVAITRAEEHCFLSYAKTRFRFGKMEFGSPSRFLKDIDVRFLQLPDTKPS
FRLKEDAHNDFSYKKREEKMMRPKQEVIPQAVPRNLKRVMPTSDSTGTTPHPDASIHGVV
EGQLIEHERFGLGEVLRMEGEGDNAKATIRFKNAGDKQLLLRFARFKVIG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattatatacaggaactgaacgaaggacagcgtgcagcggtgctttacaacgat
gggccgtcattggtgatagccggtgccggctctggaaagacgcgcgtactgacatataaa
ataacctatctgctggagaatggttaccggccgtgggatattcttgcgttgacctttacc
aataaagcggcgcgagaaatgaaagaacgcatagcacgccaggtgggtacagaccgtgcg
cgccatctatggatgggaacctttcattccatgttcttgcgcattctgcacgctgaagct
atgcatcttggattcacttcgcaattcaccatatacgacacggccgatggcaaaagtttg
atacgctctatcataaaggagatgggattggatgaaaagatatacaaacccggattggtg
caagcgcgtatatcaaatgccaagaatcatttggtttctcctgccgcttatgcaaacagt
aaagaggcttatgaagcagatcgtgcggcaaaagttcctgcccttcgcgacgtatatcag
aggtattgggaacgctgtaagcaggcagatgccatggactttgacgatttgctgttctat
acctttttgctgtttagagatcaaccggagatacttgcccgttatcaggaacaattccgt
tatattctggtagatgaatatcaagacactaattttgcacaacatagcattgtgttacag
ttgagcaagaatcaccaacgtgtatgtgtagtgggcgatgatgcacagagtatttactct
tttcgcggagccgatatcgacaatatcttgtatttcacccaaatatatcccaatgccaaa
gtctttaaattagagcagaattatcgttctactcaaaccattgtctgtgcggccaatagc
ttgataaagaagaatcatcgacagatacgcaaggaagtcttttctgaaaaagagaagggg
gaggcacttggtgtttatcaagcctatagcgatgtagaagaaggggatattgtagtaaat
aaaattaccgaattgcgtcgagagaaacagtatgcctattccgactttgccatactttac
cgcactaatgcgcaaagtcgcatttttgaagaagttatgcgtaagcgaggaatgccttat
cgcatatatggcggcttatcgttttatcagcgtaaagaaatcaaggatataatttcctat
ttccggttgatcgtaaatcctaatgatgaagaggcgttcaaacgcatcatcaattatccg
gcacgcggcatcggtgatactacagtaggtaaaatcattgcagctgccacgatgcataat
gtcagcctatggacggtactctgcgacccaccggcctatggactgacttttacaaaaagc
acggcagggaagttgcaaggctttcaggacttgatagccggcttcattgcatatgcagcc
gataagaacgcttacgagattggctccgatatcattcgccggtcgagtatcatcaatgat
atctgtcaggataattcaccggaaaatttgagccgtaaggaaaatatagaggaattggtg
aatggcatgagtgatttttgtgttcggcgacaagaggaaggaaatcccgacattctgttg
gctgattttttgtcggaagtctcattactgaccgatcaagattcggataagaacgatgat
gatgatgaaaaaataactttaatgacggttcattctgccaaggggttggagtttaagaat
gtttttgtggtgggaatggaagaaaacctttttcccagtgcaatgattggagaatctgtc
cgagcgttggaagaagagcgtagattgttttatgtagccattacacgtgcagaggaacat
tgttttttatcttatgcaaagactcgttttcggtttggcaaaatggaatttggaagtccc
agtcgttttctaaaagatatagatgtacgatttttgcagttgcctgatacaaagccctct
tttagattgaaggaagatgcgcataacgatttctcctataaaaagagagaagagaagatg
atgcgtccgaagcaagaagttatacctcaggctgttcctcgtaatttgaaacgagtgatg
ccgacctctgactccacaggaacaacgcctcaccccgatgcttctattcatggagttgtg
gaagggcaactgattgagcatgaacgcttcggtttaggagaagtcttgagaatggaaggt
gaaggggataatgccaaagcgaccattcgttttaaaaatgcgggagacaaacaacttctg
ttacgctttgcacgtttcaaggtaataggataa
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