KEGG   Bacteroides zoogleoformans: C4H11_01975
Entry
C4H11_01975       CDS       T05371                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
bzg  Bacteroides zoogleoformans
Brite
KEGG Orthology (KO) [BR:bzg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bzg03032]
    C4H11_01975
   03036 Chromosome and associated proteins [BR:bzg03036]
    C4H11_01975
   03400 DNA repair and recombination proteins [BR:bzg03400]
    C4H11_01975
DNA replication proteins [BR:bzg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    C4H11_01975
Chromosome and associated proteins [BR:bzg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    C4H11_01975
DNA repair and recombination proteins [BR:bzg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      C4H11_01975
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_1 HU-HIG MS_channel_2nd DUF5915
Other DBs
NCBI-ProteinID: AVM51887
UniProt: A0ABM6T5J6
LinkDB
Position
complement(455480..455752)
AA seq 90 aa
MNNKEFTSELSRRLGYTLKDTSDLIASLLSNMTRQFEAGNVVSIQTFGTFEVKKKAERIS
VNPNTKQRMLVPPKLVLTYKPSALLKEKFK
NT seq 273 nt   +upstreamnt  +downstreamnt
ttgaataacaaagagtttacttccgaattatcacgcagattggggtatactttgaaggat
acttctgatttgattgcttcattgctgtcgaatatgacaaggcagtttgaggccggaaat
gttgtttccatacagacattcggaacattcgaggtaaagaagaaagcggagcgcatatct
gtaaatccgaataccaaacagcgtatgctggttcctcctaaattagtgttgacctataaa
ccgagtgcgttgctaaaagaaaagtttaaatag

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