Bacteroides zoogleoformans: C4H11_01975
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Entry
C4H11_01975 CDS
T05371
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bzg
Bacteroides zoogleoformans
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bzg03032
]
C4H11_01975
03036 Chromosome and associated proteins [BR:
bzg03036
]
C4H11_01975
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_01975
DNA replication proteins [BR:
bzg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C4H11_01975
Chromosome and associated proteins [BR:
bzg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C4H11_01975
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C4H11_01975
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
MS_channel_2nd
DUF5915
Motif
Other DBs
NCBI-ProteinID:
AVM51887
UniProt:
A0ABM6T5J6
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All DBs
Position
complement(455480..455752)
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AA seq
90 aa
AA seq
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MNNKEFTSELSRRLGYTLKDTSDLIASLLSNMTRQFEAGNVVSIQTFGTFEVKKKAERIS
VNPNTKQRMLVPPKLVLTYKPSALLKEKFK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacaaagagtttacttccgaattatcacgcagattggggtatactttgaaggat
acttctgatttgattgcttcattgctgtcgaatatgacaaggcagtttgaggccggaaat
gttgtttccatacagacattcggaacattcgaggtaaagaagaaagcggagcgcatatct
gtaaatccgaataccaaacagcgtatgctggttcctcctaaattagtgttgacctataaa
ccgagtgcgttgctaaaagaaaagtttaaatag
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