Bacteroides zoogleoformans: C4H11_04370
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Entry
C4H11_04370 CDS
T05371
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bzg
Bacteroides zoogleoformans
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_04370
Enzymes [BR:
bzg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4H11_04370
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C4H11_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
EAD8
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AVM52281
LinkDB
All DBs
Position
1052652..1055903
Genome browser
AA seq
1083 aa
AA seq
DB search
MELLVYKASAGSGKTFTLAVEYIKHLIINPRAYRQILAVTFTNKATAEMKERILQQLYGI
WKCDPESDAYLKRIKEELATTRYLQAAPDRGTEELRQRAGVALQYILHDYSRFRVETIDS
FFQSVMRNLARELELNPNLNIELNTNEVLSEAVDSLIEKLTPTSPVLAWLLEYIDERIRD
DKRWNVSNEIKSFGLNIFNENYIERGEGVRECLRTPNTLKLYRNVLREMETEALEQMKGF
YDQFEGELEGHALMPEDLKGGSRGIGSYFRKLRDGKLTDKDILNATLQNSLADAGNWAAK
TSLRKDDIVRLAESSLIPLLKDAERLRPQKNRTINSCRLSLQHLNKLQLLNHIDEEVRTL
NHEQNRFLLSDTNALLHKLVREGDSSFVFEKIGANIRNVMIDEFQDTSRMQWDNFRLLLL
EGLSQGADSLIVGDVKQSIYRWRNGDWGILNSLGQTRLNNFPVRIKTLKTNRRSEANIIR
FNNQFFTTAVEYLNTQHLNELNEECYPLKQAYADVRQESPKTEARGYVKASFLEPDDEHN
YAEQTLLAMGAEVQRLLEEGIQPNDITILVRKNKNIPPIADYFDKELQLPVVSDEAFRLD
ASLAICMLIDALRYLSNPKDRISSASLIFNYKLQVLKEENDPSFHLDALLTEQPELLLPE
AFTSRLETLRLMPLYELLEELFTIFDMERIKQQDAYLFFFFDAVTEFLQNNSSDLDSFIR
YWEETLCGKTISGGETDGIRILSIHKSKGLEFHTVLIPFCDWKLENETNNQLVWCTAPEA
PYNAISLVPMNYSSTMAESVYRQDYLHERLQLWVDNLNLLYVAFTRAGKNLILWSKNGQK
GTVSELLANALPPIANNDEGNWDEEAAVYESGRIVPSALPRADVRHNAQDGSIINKFSQK
AVKLPIRMESTLHDIEFRQSNRSAEFIAGIDETESDRRFINRGRLLHTLFSAIETEKDID
NAISRLVFEGIIGRTETEKEIRALTARAFSLPQIKDWYSGTWQLFNECDIIWQENGILRT
RRPDRVMMRNEEVVVVDFKFGKTNKKYNKQVKDYMQLLARMGYASDKIKGYLWYVEEEIV
EKV
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggaactattggtatataaggcttccgcaggctcaggaaagacgtttacactggccgtg
gaatacatcaagcacttgataatcaaccctcgcgcctaccgtcaaatacttgccgtgact
ttcaccaataaagctacggcagaaatgaaagaacgaatcctgcaacaactctacggcatc
tggaaatgtgatccggaatctgatgcctatctgaaacgcatcaaagaggaactggcaaca
acccgctatttgcaagctgccccggacagagggacagaagagttgcggcaacgtgcgggg
gtggcattgcaatacatacttcatgattacagccgcttccgtgtagagaccatcgactct
tttttccagtccgttatgcgcaacttagcccgcgaactagaactaaatcctaatctcaac
atagagctaaacaccaacgaagtgctgagcgaggccgtagacagtcttattgaaaagctc
actcctacttcaccggtactggcttggctgctggagtatatagacgaacgcattcgcgat
gacaaacgctggaatgtttcaaacgaaatcaaaagtttcgggctcaacattttcaatgaa
aactatatcgaacgaggcgaaggcgtgagagaatgcctgcgcacgcccaacacattgaaa
ctctatcgaaatgtgttacgtgaaatggagacagaagctttagagcaaatgaaaggcttc
tacgatcagtttgaaggggaattggaagggcatgcgctcatgccggaggatttgaaagga
ggctctcggggcataggcagttacttccgaaaacttcgtgatggcaagttgacagataaa
gacatattgaacgccacgctgcaaaacagtctggcagatgccggaaactgggccgctaaa
acatccttgcgaaaagatgacatcgtccggttggcagaaagcagcctgataccgctgttg
aaagatgccgaacggctacgcccgcaaaaaaaccgtaccatcaacagttgccgcctttca
ctgcaacatctcaacaagttgcaactgctcaatcacatcgacgaagaagtacgtacactg
aaccacgagcagaaccgttttttactgtctgacaccaatgctctgttgcacaagttggtg
cgcgaaggcgactcttctttcgtattcgagaaaatcggtgccaatatacgaaatgtcatg
atcgacgagtttcaggataccagccgtatgcaatgggacaactttcgcttgctgctactc
gaagggctctcgcaaggagccgacagcctgattgtaggagatgtaaagcaatccatttat
cgttggcgcaacggagactggggcattctgaacagtctgggacaaaccaggctaaacaat
tttcccgtccgcataaaaacgctgaagaccaaccggcggagcgaagcaaatatcatccgc
ttcaacaatcaattcttcactactgctgtggagtatctcaacactcaacatctgaacgag
ctgaatgaagaatgctaccccttgaaacaggcatatgccgatgtcaggcaagaatctcca
aagacagaagcacgcggttacgtaaaagcctcttttcttgagccggacgatgaacacaac
tatgcggaacagacactgcttgccatgggagcagaagtgcaaagattgcttgaagaaggc
atacaacccaacgatatcaccattcttgtacgcaaaaacaagaacattcctcctatagcg
gattacttcgacaaggaacttcagctacccgttgtatcagacgaagctttccggctggat
gcatctctcgccatctgcatgctgatagacgccttgcgctatttgtccaatccgaaagat
agaatctcgagtgcttcgctcatattcaattataaactgcaagttctcaaagaagagaac
gatccgtctttccatcttgacgccctattgacagagcaacccgaactactgcttcctgag
gccttcacatctcgtctggagacgttgcgcctgatgcctctatacgaactgctggaagaa
ttattcaccatattcgatatggagcgtatcaagcaacaagacgcctatctcttcttcttt
tttgatgcggtgacggagtttcttcaaaacaattcatccgatttggatagcttcatccgt
tattgggaagaaacactttgcggcaaaacgatttccggtggtgaaacggacggtatacgc
atactttccatacacaaatccaaaggactggagttccataccgtactcatcccgttctgc
gattggaaactggaaaacgaaaccaataaccagctggtatggtgtaccgctcccgaggca
ccctacaatgccatcagccttgttccgatgaactactcaagcacaatggcagagtcagtc
taccgacaagactatctacatgaacgcctgcaactgtgggtggacaatctcaaccttttg
tatgtagcctttacgcgtgccggaaagaacctcatcctctggagcaagaatggtcaaaaa
ggaacggtttccgaactgctcgccaatgctttgccgcctattgccaataatgacgaagga
aattgggatgaagaagcagcagtctatgaaagcggacggattgtcccgtctgccctcccc
cgggcagatgtccgtcacaatgctcaagacggcagtatcatcaataaattctctcaaaaa
gccgtaaagctgcccatccgcatggaaagcacgcttcatgacatcgagttcagacagtct
aaccgttcggccgaattcattgccggaatagatgaaaccgaatccgaccgccgtttcatc
aatcgcggacggctactgcacactctgttttctgccatcgaaacagaaaaagatatcgac
aatgccatcagccgactggtgttcgagggaatcatcggccgaaccgaaacagaaaaggaa
atacgtgcattgactgcacgcgctttctccttgcctcaaatcaaagattggtattcgggc
acatggcaactcttcaacgagtgcgacatcatctggcaagaaaacggaatactccgaacc
cggcgcccggaccgtgtcatgatgcgcaatgaagaagttgtcgtagtggacttcaaattt
ggaaaaaccaacaagaaatacaacaagcaggtgaaagactatatgcaactgcttgcccgc
atgggatatgcctctgacaaaatcaaaggatatctatggtatgtagaagaagaaatcgtt
gagaaagtataa
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