Bacteroides zoogleoformans: C4H11_05300
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Entry
C4H11_05300 CDS
T05371
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4H11_05300 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bzg03019
]
C4H11_05300 (recQ)
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_05300 (recQ)
Enzymes [BR:
bzg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4H11_05300 (recQ)
Messenger RNA biogenesis [BR:
bzg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C4H11_05300 (recQ)
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4H11_05300 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
P-loop_SecA
Helicase_Sgs1
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AVM52433
LinkDB
All DBs
Position
complement(1253782..1255593)
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AA seq
603 aa
AA seq
DB search
MLKTLKTYFGYDSFRPLQEEIIRNVLLRKDALVLMPTGGGKSICYQLPALLSEGTAVVVS
PLISLMKDQVEALCANGVAAGALNSNNDETENAALRRACLEGKLKLLYISPERLLAEVNY
LLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGVLHELFPQVPIIALTATADKITREDII
KQLHLNEPEIFISSFDRPNLSLAVKRGYQQKEKSKAILDFIARHPQESGIIYCMSRSKTE
SVAQMLQKQGIKTVVYHAGLPAVQRDKAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIH
YNLPKSIESFYQEIGRAGRDGLPGDTLLFYSLADLILLTKFATDSGQQSINLERLQRMQQ
YAEADICRRRILLNYFGESTAHDCGNCDVCRNPPERFDGTVIVQKALSAIVRADQQIGTG
ILVDILRGTMSAEVAERGYHRLKTFGAGREVPARDWHDYLLQMLQLGYFEVAYNENNHLK
ITPSGTDVLYGRASAQLAVIRRGEETQPVRGRKRKSTVPAKELPLGLPNVESGELFEALR
LLRKRLADQEALPAYIVLSDKVLHLLSTSRPTTVEEFGNISGIGEYKKKKYGKEFVELIR
KYC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaacacttaagacatatttcggttacgatagtttccgccctttgcaggaggag
ataatccgcaatgtactgcttcgtaaagacgccttggtgctgatgcctacgggaggtggc
aagtccatctgttaccaacttcctgctctgttgagcgaaggtacggcggtagtggtttct
cctcttatctctctgatgaaagatcaggtggaagcgctttgtgccaacggtgttgccgcc
ggtgcgctgaacagcaacaacgatgagactgaaaatgccgctttaaggcgtgcgtgcctg
gaagggaaactgaaattactctatatctctcctgaaagactgctggcggaagtgaactat
ttgttgagagacatgcacatttctttgtttgccatcgacgaagctcattgcatctcgcag
tgggggcatgatttccgtcctgaatatacgcagatgggggtgctgcacgaattgtttccg
caggttcctatcattgcgctgacggctacggccgacaagataacccgcgaggacatcatc
aagcagttgcacctcaacgaacctgaaatttttatctcctctttcgaccgtcctaatctg
agccttgccgtaaaacggggttatcagcaaaaggaaaaaagtaaggctatccttgacttc
attgcccgccatccgcaagaaagcggcattatttattgcatgagtcgcagtaagaccgag
tcggtagcgcagatgcttcagaaacaaggaataaaaaccgtggtttatcatgcgggtttg
cctgctgtgcaaagagacaaggcacaagacgactttatcaatgaccgggtgcaggtggtg
tgtgctaccattgctttcggaatggggatagataaaagcaacgtacgttgggtgattcat
tataatctgcccaaaagcatcgaaagcttttatcaggaaatagggcgtgccggacgagac
ggactgcccggcgacacgcttctgttttattcgctggccgaccttattctgcttacaaaa
tttgcaacagacagcgggcagcagagcatcaatttggagcgactgcagcgcatgcagcaa
tatgccgaagcagacatctgccggcgtcgcatattgttaaactatttcggagaaagtacg
gctcacgattgcggaaattgtgatgtttgcagaaatcctcccgaacgttttgacggtacc
gtcattgtgcaaaaggcgcttagtgccattgtgcgtgccgaccagcagataggaaccggc
attctggtggatatactcagaggaaccatgagtgccgaggtggcggaaaggggttatcac
cggctgaaaactttcggagccgggcgtgaagtgcctgcccgcgattggcacgactacttg
ttgcagatgcttcaattaggttattttgaagtagcttacaatgaaaacaatcacctgaaa
attaccccaagcggaacggatgttttatatggcagggcatctgcgcaacttgctgttatc
cggcgaggcgaagaaacacaacctgtccgagggcgtaagcgaaaatccaccgttcctgcc
aaagagttgccgttgggtctgcccaatgtggaaagcggggaattgttcgaggcgctccgg
ttgctccgcaagcgcttggccgaccaagaagcgcttcctgcctacatcgttctgtccgac
aaggtgcttcacctgctcagcacttcccgtcccacaaccgtagaagagtttgggaatatc
agcggcatcggcgaatacaagaagaaaaaatacgggaaggaattcgtcgaactgatacgg
aaatactgttga
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