Bacteroides zoogleoformans: C4H11_06675
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Entry
C4H11_06675 CDS
T05371
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg02020
Two-component system
bzg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4H11_06675 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C4H11_06675 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bzg03021
]
C4H11_06675 (rpoN)
Transcription machinery [BR:
bzg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4H11_06675 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
DUF7090
CEP76_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVM52660
UniProt:
A0ABN5IIN9
LinkDB
All DBs
Position
1558819..1560306
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AA seq
495 aa
AA seq
DB search
MAQGSRQIQTQTQQQVQTLSPQQILVVKLLELPTMELEDRVRAELLENPALEEGKDEAAT
DEYADAPEAGTDDGGDTDYDSLSDYLTEDDIPDYKLQENNRSKGEQPEEIPFSDTTSFYE
TLKEQLSERNLSERQRELAEYLIGSLDDDGLLRKSLDSISDELAIYAGIDASVQELEEAL
KTVQDFDPAGLGARNLQECLLIQIRRKMEQQSPTTPDSLLRIEEDIIGQCYEEFTRKHWE
KIRQKLNLPEDVCDRAIKEVCKLNPRPGASLGETIGKNMQQIVPDFIVDTYDGGTINLTL
NNRNVPELRMSRDFTEMVEEHTKNKANQSKASKDAMMFLKQKMDAAQGFINAVKQRQNTL
MTTMQAIIDLQRPFFLEGDESLLRPMILKDVAERAGLDISTVSRVSNSKYVQTNFGVYPL
KFFFNDGYTTGDGEEMSVREIRKILKECVENENKKKPYTDDELTEILKEKGYPIARRTVA
KYRQQMNIPVARLRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttcccgacagatacagacgcagacgcaacagcaggtacagacgctgtcg
ccgcaacagattctggtggtgaagttgctggaacttcccaccatggaactggaagaccgc
gtgcgtgccgaacttttggagaatccggcactggaagagggcaaagacgaagccgcgacc
gacgagtatgccgacgcacccgaagccggcacggacgacggaggcgacaccgactacgac
tcgctgagcgactacctgaccgaagacgacatccccgactataaattgcaggagaacaac
cggagcaaaggcgagcagcccgaagagattcctttttcggacaccacctcgttctacgaa
accctgaaggagcaactgagcgaacgcaacctcagcgaacggcaacgcgaactggccgag
tatctcatcggctcgctggacgacgacggcctgctgcgcaaatcgttggacagcatcagc
gacgagctggccatttatgcgggcatcgacgcctctgtacaggaactggaggaggcgctg
aagacggttcaggatttcgaccccgccggactgggggcccgcaacctgcaggaatgtctc
ctcatccagattcgccgcaagatggaacaacagtcgcctactacccccgactccttgctg
cgcatcgaagaggacatcatcggccaatgctacgaggagttcacccgcaaacattgggag
aagatacggcagaagctgaatctgccggaagacgtctgcgaccgggccatcaaggaggtc
tgcaagctgaacccccgcccgggtgcctctttgggcgaaaccatcggcaagaacatgcaa
cagattgtgccggacttcatcgtggatacgtatgacggcggcaccatcaacctgacgctg
aacaaccgcaacgtgccggaactgcgcatgagccgcgacttcaccgaaatggtggaggag
cataccaagaacaaggcgaaccaatcgaaagcgtcgaaggacgccatgatgttcctgaaa
caaaagatggacgcggcgcaaggcttcatcaacgccgtgaagcaacggcagaatacgctg
atgaccaccatgcaggccatcatcgacctgcaacgcccgttcttcctcgagggcgacgag
tcgctgctacgccccatgatactgaaagatgtggccgagcgcgccgggctggacatctcg
accgtctcgcgcgtaagcaacagcaaatacgtgcagaccaacttcggagtgtatccgctg
aagttcttcttcaacgacggctataccaccggagacggcgaagaaatgtccgtgcgcgaa
atacgcaagatactgaaagaatgcgtggaaaacgagaacaagaagaagccctacacggac
gacgaactcaccgaaatattaaaagagaaaggctatccgatagcccgccggacggtggcg
aagtaccgccagcagatgaatattccggtggcaagactgagacgataa
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