Bacteroides zoogleoformans: C4H11_08335
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Entry
C4H11_08335 CDS
T05371
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C4H11_08335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_08335
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
C4H11_08335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_27
DUF4595
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVM52945
UniProt:
A0ABM6T7X6
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Position
2000467..2003088
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AA seq
873 aa
AA seq
DB search
MSHEDIVLTPMMKQFLDLKAKHPDAVMLFRCGDFYETYSTDAVVAAEILGITLTKRANGK
EKTVEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKLTKKLVKRGITELVTPGVSIND
NILNHRENNFLAAVHFGKGACGVAFLDISTGEFLTAEGPFDYVDKLLNNFSPKEVLFERG
RRGMFEGNFGSKFFTFELDDWVFTETTAREKLLKHFEVKNLKGFGVEHLRNGVIASGAIL
QYLIMTQHTQIGHVTSLARIEEDKYVRLDKFTVRSLELMGSMNDGGSSLLSVIDKTISPM
GARLLRRWLVFPLKDVSPIDERLDVVEYFFRQPDFKDLIEEQLHLIGDLERIISKVAVGR
VSPREVVALKVALQAIEPIKEACMQADNASLNRIGEQLNICRSIRDRIDREINNDPPLLV
NKGGIIKQGVNAELDELRRIAYTGKDYLLQVQQRESEQTGIPSLKIGYNNVFGYYIEVRN
VHKDKVPQEWIRKQTLVNAERYITQELKEYEEKILGAEDKILALETQLYNELVQSLAEFI
PAIQIDANQIARLDCLLSFATAARENNYIRPVVADDDVLEIRQGRHPVIEKQLPIGEKYI
ANDVMLDSNTQQIIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTR
VGASDNISVGESTFMVEMNEAADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIH
EHPRAKARTLFATHYHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIH
VAKLAGMPKSIVRRADEILRQLEMENRQTGTVSGKTITEGASSAGGMQLSFFQLDDPVLC
QIRDEILNLDVNNLTPLEALNKLNDIKRIVKGK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgaagatattgtcctcaccccgatgatgaaacagtttcttgacttgaaggcg
aaacatcccgatgccgtcatgctgtttcgttgcggcgacttctacgaaacctattctacc
gatgccgtggtggctgccgaaatcttgggcatcacgctgaccaagcgtgccaacggcaaa
gaaaagacggttgaaatggcaggctttccccaccatgcgttagacacctatctgcccaaa
ctgatacgcgccgggaagcgcgtagccatctgcgaccagctggaagacccgaaactgaca
aagaaactcgtgaagcggggcatcacggagctggtgacaccgggtgtatccatcaacgac
aacatattgaaccatcgggagaacaactttctggccgccgtgcatttcggcaaaggcgct
tgcggagtggcttttctggatatatccaccggtgagtttctcacagccgaaggtcctttc
gactacgtggacaagctgctgaacaacttctcgcccaaagaagtgcttttcgaacgaggc
cggaggggtatgttcgaaggtaacttcggaagcaagttctttactttcgagctggacgac
tgggtgtttaccgaaaccaccgcccgcgaaaaactgctgaagcatttcgaagtgaaaaac
ctgaaagggttcggcgtggagcatctcagaaacggtgtcatcgcttcgggggctatcctg
caatacctcatcatgacgcaacatacgcagataggacatgtcacctcgctggcccgcata
gaagaagacaaatacgtccgtctggacaagttcacggtgcgcagtctggagttgatgggg
tcgatgaacgacggcggaagcagcctgctcagcgtgatagacaagaccatcagtccgatg
ggggcgcgtctgctgaggcgttggctggtatttccgttgaaagatgtgagccctatcgac
gaacgcctcgatgtggtggagtatttctttcgccagcccgatttcaaggatttgatagaa
gagcaactgcacctgataggcgacttggaacgcatcatttccaaagtggcggtggggcgt
gtttctcctcgcgaagtggtggctttgaaggtggctttacaagccatcgaacccatcaag
gaagcatgtatgcaggccgataatgccagtctgaaccgcatcggcgaacagctgaacatc
tgccgctccattcgcgaccgcatcgatagggaaatcaacaacgacccgccactgctggtc
aacaagggaggcatcatcaaacaaggtgtcaatgccgaactggacgaattgcgccggata
gcctacacgggcaaggactacctcttgcaggtgcagcagcgcgaaagcgaacagacgggc
attcccagtctgaagattggctacaacaacgttttcggctattatatcgaggtgcgcaac
gtgcataaagacaaagtgccgcaggagtggattcgcaaacagacgctggtcaatgccgaa
cgttacatcacgcaggaactgaaagagtatgaagagaaaattctgggcgcggaagacaag
atactggcgttggagacgcagttgtacaatgaacttgtgcagtctttggccgagtttatc
ccagccatccagatagacgccaaccagatagcccggttggactgcttgctctcgtttgcc
acggcagcgcgcgaaaacaattacatccgtcccgtcgttgccgacgatgacgtgctggaa
atccggcaaggccgtcatccggtcatcgagaagcagctcccgataggagagaagtacata
gccaacgacgtgatgctcgacagcaatacgcagcaaatcatcatcatcaccggtccgaac
atggcaggtaagtccgctttgctccggcagacggcgctcattaccctgcttgcccaaatc
ggcagctttgttccggccgagagcgcccacatcggtctggtggataagatattcacccgt
gtaggcgccagcgacaatatctccgtaggcgagtctacttttatggtggagatgaacgag
gccgccgatatcctgaacaacctctctccgcgcagccttgtgcttttcgacgaattggga
cggggcacttccacatacgacggcatctccattgcttgggccatcgtggagcacattcac
gaacatcccagagccaaagcacgcacgctgtttgccacgcactaccatgagctgaacgag
atggagaaaagcttcaagcgcatcaaaaactacaatgtttcggtgaaggaggtggataat
aaagttattttcctgcgcaagttggagcgcggaggcagcgaacactctttcggtatccat
gtggcgaagttggcgggcatgcctaaaagcattgtgaggcgtgccgacgaaattctgcgt
cagcttgaaatggagaatcgccagactggaacggtgagcggaaagaccattaccgaggga
gcctcttcggcagggggtatgcagctcagcttcttccagctcgatgacccggtgctttgt
cagatacgcgatgaaatactgaatctggacgtgaacaacctcactccgctggaggcgctg
aacaagttgaatgacatcaagaggatagtgaaggggaaataa
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