Bacteroides zoogleoformans: C4H11_10140
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Entry
C4H11_10140 CDS
T05371
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg03030
DNA replication
bzg03430
Mismatch repair
bzg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4H11_10140
03430 Mismatch repair
C4H11_10140
03440 Homologous recombination
C4H11_10140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bzg03032
]
C4H11_10140
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_10140
Enzymes [BR:
bzg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4H11_10140
DNA replication proteins [BR:
bzg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4H11_10140
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4H11_10140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AVM53242
LinkDB
All DBs
Position
2450803..2454600
Genome browser
AA seq
1265 aa
AA seq
DB search
MQDFVHLHVHTQYSLLDGQASVSRLVDKAMKDGMKGIAVTDHGNMFGIKEFTNYVNKKNS
GPKGEIKDLKKQIAGIESGDVACEDKEAEIARCRAALAEAESKLFKPIVGCEMYVARRTM
DQKEGKQDQSGYHLVVLAKNEKGYHNLIKLVSHAWTRGYYMRPRTDRSELEKYHEGLIIS
SACLGGEVPKRITNDQIEEAEEAIRWYKKIFGEDYYLELQRHKATAPRANYEAYPLQQKV
NAKILELARKYDVKVICTNDVHFVDEENAEAHDRLICLSTGKDLDDPTRMLYTKQEWMKT
KAEMNALFADVPEALSNTLEILDKVEYYSIDHAPIMPTFAIPTEFGTEEEYRRKYTEKDL
FDEFTRDENGKTVLNEEKANAKIKQLGGYDKLYRIKLEADYLAKLAFDGAKNLYGDPLSD
EVKERLVFELHIMKTMGFPGYFLIVQDFINAARTQLGVSVGPGRGSAAGSAVAYCLGITK
IDPIQYDLLFERFLNPDRISLPDIDVDFDDDGRGEVLRWVTEKYGQEKVAHIITYGTMAT
KMAIKDVARVQKLPLSESDRLCKLVPDKIPDKKLNLPNAIAYVPELQAAEASPDPLVRDT
MKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTG
LIKMDFLGLKTLSIIKEAVANVRLHRGQEIDIDKISIDDPATYKLYCDGRTVGTFQFESA
GMQKYLRELQPGTFEDLIAMNALYRPGPMDYIPDFIDRKWGRKPIEYDIPIMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFISGGQKNGHDPKVL
EKIWGDWEKFASYAFNKSHATCYSWVAYQTAYLKANYPAEYMAAVMSRSLSNITDITKLM
DECKAMGINTLGPDVNESNLKFTVNNEGNIRFGLGAVKGVGEAAVQSIMEEREKNGPYKG
IFDFVQRVNLNACNKKNIECLALAGGFDSFPELKREQYFAANSKNEVFIETLMRYGNRYQ
MDKAAAANSLFGGENVVDIATPEIPSAERWSDLERLNKERDLVGIYLSAHPLDEYSVVLE
HVCNTRMAELEDKTALAGREITMGGIVTSVRRGISKNGNPYGIARIEDYSGSAELPFFGN
DWVTYQGYLGERTFLFIKARCQPKQWRQDELDLKITSMELLPDVKEKLIEKITILIPLGM
LNKALIAELGELTKERPGNTELYFKVVDAESKMGVDFISRPIKLSVGHELISYLKEAPGL
DFRIN
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattttgttcatttacatgtgcacacccaatattcgctgctggatggtcaggcc
agcgtcagtcgcttggtagacaaagccatgaaagatggtatgaagggaattgccgtgacc
gaccatggtaacatgttcggcattaaggaatttaccaactatgtcaacaagaagaatagt
ggtcccaaaggcgaaataaaagacctcaagaagcagattgccggcattgagagcggagac
gtcgcgtgtgaagacaaggaagcggaaatagctcgttgtcgggccgcgcttgccgaggcc
gagagcaagcttttcaagccgattgtaggctgcgagatgtatgtggctcgccgcaccatg
gaccaaaaggaagggaagcaagaccaaagcggttatcacttggtggtattggctaagaac
gaaaaaggttatcataacctcatcaaactcgtgtcgcatgcttggacgagggggtattac
atgcgtccgcgtaccgaccgcagcgagttggaaaaatatcacgaaggactgattatcagc
tctgcctgccttggcggagaggtgcctaaaaggataaccaatgaccagatagaggaagcc
gaagaggctatacggtggtataaaaagatattcggcgaagactactatctggaactccag
cgccataaggccactgctccgcgcgccaattatgaagcttatccgttgcaacagaaggtc
aatgccaaaattctggagcttgccaggaaatatgatgtgaaagtgatctgcaccaacgac
gtacactttgttgacgaagagaatgcggaggcgcacgaccgcttgatttgcctgagtacg
ggcaaggatctggacgaccccactcgcatgctttataccaagcaagagtggatgaagaca
aaggccgagatgaatgctctgtttgccgatgtgcctgaggccttgtccaacacgttggag
attttggataaggtggagtattactccatcgaccatgcgcctatcatgcccacttttgcc
attccgacggagttcgggacagaggaagagtatcggcggaaatatacggagaaagattta
ttcgatgagtttacccgggatgaaaacgggaagacggtattgaatgaggaaaaagccaat
gccaagattaagcagttgggcggttacgataaattgtatcgcatcaagttggaagccgac
tatctggcgaagttggcattcgacggtgcgaagaatttgtatggtgaccctttgtcggat
gaggtgaaagagcgtttggtttttgagttgcatatcatgaagacgatgggttttccggga
tacttcttgattgtccaggattttatcaatgccgcccgtacgcaattgggcgtttctgtg
gggccggggcgcggttcggcggccggttcggctgtggcttattgtctgggtattacgaaa
atagaccccattcagtatgacttgctgttcgagcgtttcctcaatcccgaccgtatttct
ctaccggatatcgatgtggacttcgatgatgacggacgcggcgaggtgcttcggtgggtg
acggagaaatatgggcaagagaaagtggctcatatcattacgtatggcacgatggctacc
aaaatggctatcaaagatgtggctcgcgtacagaaactgcctttgagcgaatcggataga
ttgtgcaagcttgtgccggataaaattcccgataagaagcttaatctgccgaatgccatt
gcgtatgtgcccgaattgcaggctgccgaggcatcgcccgacccgttggtgcgcgatacg
atgaagtatgccaagatgctggaaggcaacgtgcgtggcacgggtgtacacgcttgcggt
accattatttgccgggatgatatcacggattgggtacctgtgagcacggcagacgataag
gagacgggcgagaagatgcttgttactcaatacgagggttcggtaatcgaagatacgggg
ttgatcaagatggactttttgggattgaaaactctgtccatcattaaagaggctgtcgcc
aatgtgcggttgcaccgcggacaggagatagatatagataagatttccatcgacgatcct
gccacttataaactctattgcgacgggcggaccgtcggcacgttccagtttgagtcggcc
ggtatgcagaagtatttgcgcgagctacagcccggtacgtttgaagacttgattgccatg
aatgccctttatcgtccggggcctatggattatattccggatttcattgaccgtaaatgg
ggccgcaagcccatcgagtacgatattccgattatggaaaagtacttgaaggatacgtat
ggcattacggtttatcaggagcaggtcatgctattgtctcgtttgttggccgattttacc
cgtggcgaatccgatgctttgcgtaaggcgatgggtaagaagttgcgcgacaagttggat
catatgaagcctaaattcatttcaggcggacagaagaacgggcacgacccgaaagtgctt
gagaaaatctggggggactgggagaaatttgcttcctatgctttcaacaagtcgcatgcc
acgtgttattcatgggtggcttatcagactgcttatctgaaagcgaactatccggccgag
tatatggctgccgtcatgagtcgaagcttgtcgaacataaccgatatcacgaagctgatg
gatgaatgtaaagccatgggcattaatacgctggggccggatgtcaacgagagtaacctg
aagtttacggtgaacaacgaagggaatatccgtttcgggcttggtgccgtgaagggggta
ggcgaggctgcggtgcagagtatcatggaagagcgtgagaaaaacgggccttataaagga
atctttgattttgtacaacgtgtcaacctgaatgcctgcaataagaaaaacatcgaatgc
ttggcactggccggaggctttgacagcttccccgagctgaaacgcgaacagtattttgct
gcaaactccaagaatgaggtgttcattgaaacattgatgcgctatggcaaccgctatcag
atggataaggctgccgcggccaattcgttgttcggtggcgagaatgtggtagatatcgct
actccggaaatcccctcggccgagcgttggagcgatctggaacgattgaacaaggaacgt
gacttggtaggaatctatctttccgcgcatccgttggatgaatattcggtcgtgctggaa
catgtttgcaacacccgaatggcggaactggaagacaagacggcgcttgccggacgtgaa
ataacgatgggaggaattgtcacttcggttcgccgcggcatcagcaagaacggcaatcct
tatggcattgcacgaattgaggattattccggttcggccgaacttccattcttcggtaat
gactgggtgacctatcaagggtatcttggtgagcgcacattccttttcatcaaggctcgc
tgccaacccaaacaatggcggcaggatgagttggatttgaaaatcacttcgatggaactt
ctgccggatgtaaaggaaaaattgattgaaaagataaccatactcattccgcttggtatg
ttgaataaagctttgattgcggagctgggcgaacttaccaaggagcgtccgggcaacacg
gaactttatttcaaggtagttgacgcagaaagcaagatgggggtggactttatttctcgt
cctataaagctttctgtggggcatgaactgatctcttatttgaaagaagcacccggcctt
gacttccggattaattag
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integrated database retrieval system
