Bacteroides zoogleoformans: C4H11_10400
Help
Entry
C4H11_10400 CDS
T05371
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bzg
Bacteroides zoogleoformans
Pathway
bzg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bzg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4H11_10400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bzg03019
]
C4H11_10400 (recQ)
03400 DNA repair and recombination proteins [BR:
bzg03400
]
C4H11_10400 (recQ)
Enzymes [BR:
bzg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4H11_10400 (recQ)
Messenger RNA biogenesis [BR:
bzg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C4H11_10400 (recQ)
DNA repair and recombination proteins [BR:
bzg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4H11_10400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_40
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AVM53284
UniProt:
A0A562V929
LinkDB
All DBs
Position
2507751..2509934
Genome browser
AA seq
727 aa
AA seq
DB search
MAGKKTNLTDQLKKYFGFDAFKGNQEAIMENLLAGNDTFVLMPTGGGKSLCYQLPSLLME
GTAIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKSAIDQVKADILSGKTKLLYVA
PESLTKEENVEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTA
TATPKVQHDIQKNLGMVEAQVFKSSFNRPNLYYEVRSKTVNVDKDIIKFIKNNPEKSGII
YCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVTTIAFGMGID
KPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE
IGKQLLLETAAYAESSVCRRKSLLHYFGEEYTEENCGNCDNCLNPKKQVEAQELLCTVIE
TILSVKENFKADYIIDVIQGRETSEVQAHRHEELDVFGSGMDEEDKTWNAVIRQALIAGY
LSKEVENYGLLKVTEDGKKFLKHPKSFKIVEDNDFEDTEEEAPARGGATCAVDPTLYSIL
KDLRKKLSKKLEVPPYVIFQDPSLEAMATIYPVTLDELQNIPGVGAGKAKRYGEEFCKLI
KRHCEENEIERPEDLRVRTVANKSKMKVAIIQAIDRKVALDDIAMSKGIEFEELLDEIEA
IVYSGTKLNIDYFLEDIMDEDHMLDIYDYFKESTTDKIDDALDELGDDFTEEEVRLVRIK
FISEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaagaagactaatttgacagaccagctgaagaaatacttcggattcgatgcg
tttaaaggaaatcaggaagcgataatggagaatctattggcaggcaacgatacttttgtg
ctgatgcctaccggtggaggaaaatccttgtgttaccagttgccctctttgttaatggag
gggacggctatcgtgatatctcctttaatagctctgatgaaaaatcaggttgatgcgatg
cgtaatttcagtgaagaagacggaattgcccattttatcaattcttcccttaataaaagt
gcgatagatcaagtcaaggctgacatcctcagcggtaagacaaaactgttgtatgtggct
cctgagtctttgactaaagaagagaatgtggagttcttaaagacggtaaagatatcgttt
tatgccgtagacgaggctcattgcatttccgagtggggacatgattttcgtcctgaatat
cgtcgcatccgccctatcatcaatgagataggaaaagccccgctgattgcattaactgcg
acggccactcctaaagtgcagcacgatattcagaaaaacctgggtatggtagaagcgcag
gtattcaaatcgtcgttcaatcgtccgaacctctattatgaggtgcgttctaagacagta
aacgtagataaagatatcatcaagttcattaaaaacaatcccgagaaatccggtattatc
tattgtctgagccggaagaaggtggaagagcttgctgaaattttacaggcgaacggaatc
aatgcccgtgcctatcatgccggaatggattctgccacacggacacagaatcaagatgac
ttcttgatggagaagattgatgtgatcgtgactaccattgcctttggtatgggaatcgat
aagcctgatgtgcgttatgtcatccattacgatatccccaaaagtctggaaggatattat
caggagacgggacgtgccggaagagatggaggggaagggcagtgtattactttctatacc
aataaagatttgcagaaacttgagaagtttatgcaagggaagcctgtcgcagagcaggaa
ataggcaagcagcttctgctggaaacagctgcgtatgctgaatcttctgtatgtcgccgg
aagtcattgcttcattatttcggtgaagaatatacggaggaaaattgtggtaattgtgac
aactgtttaaacccgaaaaagcaagtggaagctcaagaattattatgtactgtgattgaa
acgattctctcggtaaaagaaaattttaaagcggactatattatagatgtaatacaaggc
agagaaacatcggaggtgcaagctcatcggcacgaggagcttgatgtgttcggctccggt
atggacgaagaggataaaacgtggaatgctgtcattcgccaagctctcattgccggttat
ttgagtaaagaagtagaaaactacggtttgctgaaagtgacagaggatggtaaaaaattc
ctcaagcatcctaagtcgttcaagatagtagaagacaatgattttgaggatacggaggaa
gaggcacctgcacgcggaggagctacatgtgccgtagatcctacgttgtactccatactg
aaagatctgcgcaaaaaactgtccaagaagttggaagtgccgccttatgtcatctttcaa
gatccttctttggaagcaatggccactatttatccggtgacgctggatgaactgcaaaac
attcccggcgtgggagccggtaaggccaaacgttacggcgaagagttttgcaaactgata
aaacgccattgcgaggagaacgagatagaacgtccggaagacttgcgcgtgcgtaccgta
gccaataaatcaaaaatgaaagtggccattattcaggccattgaccgcaaggtggcattg
gatgatattgccatgtcaaaaggtattgagtttgaggaattgttggatgaaatagaggcg
attgtttattcgggaaccaagctgaatatcgactattttctggaagacatcatggatgaa
gaccacatgcttgatatctatgattacttcaaggagtctacgaccgacaagatagacgat
gctttggatgaactgggagatgactttacggaagaagaagttcgtttggtgcgtatcaaa
tttatctcagagatggcaaattga
DBGET
integrated database retrieval system
