Bacillus zhangzhouensis: NF868_10235
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Entry
NF868_10235 CDS
T08887
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bzh
Bacillus zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
bzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bzh03019
]
NF868_10235
03009 Ribosome biogenesis [BR:
bzh03009
]
NF868_10235
Enzymes [BR:
bzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NF868_10235
Messenger RNA biogenesis [BR:
bzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NF868_10235
Ribosome biogenesis [BR:
bzh03009
]
Prokaryotic type
rRNA helicases
NF868_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UYO34485
LinkDB
All DBs
Position
complement(1994583..1995902)
Genome browser
AA seq
439 aa
AA seq
DB search
MKETKFTTYELKPFIIDAIHELGFYEPTDIQKRIIPAVLKGESVIGQSQTGTGKTHAYLL
PLIHSIDPSKEQVQVVITAPTRELANQIFKEAQTILKKASPEEEIKAKLYIGGTDKQKSI
QKLKNQPHLVVGTPGRIADLIHEQALNVYKATSLVIDEADLMLDMGFLEDVDRIGAQMPE
QLQMLVFSATIPEKLKPFLKKYMDNPKYAHVEPRRITAENIQHILVPSKQRDKLKLLHEM
VTNVQPYLGIIFANTKTTVDEIASFLQEKGMKIGVLHGGLTPRERKKVMKQIEDLEFTYI
VASDLAARGIDIKGVSHVINYELPSDLDFYVHRVGRTARAGSSGIAMTIYELADEDALIQ
IEKMGVVFENKTIVHGEWRDADDRLKRQRRKKAPNEMEEKAKRLVRKPKAVKPGYKKKMT
REIDKIKRQERRKSKRNGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacgaaatttacgacatatgaattaaagccttttattatagatgctattcat
gaactaggcttttatgagccgactgatattcaaaaaagaatcatccctgctgttttaaaa
ggagaaagcgtgattggccagtcacaaacaggaacaggaaaaactcatgcgtacttactg
ccgctgattcattcaattgatccaagcaaagagcaggtacaagtggtgattactgcacct
acaagagaattagccaatcaaattttcaaagaagctcaaacgattttaaagaaagcctct
ccagaagaagagatcaaagcaaagctttacattggcggaacggacaagcagaaatcaatt
caaaagttaaaaaaccagccgcatttggttgtcggcacacctggacgtattgctgacctc
attcatgagcaggcgctgaatgtttacaaagcaacctctcttgtcattgatgaagcagat
ttaatgctggatatgggatttttagaagatgtggaccgtattggtgcacaaatgccagaa
cagctgcaaatgcttgtgttctctgcaaccatcccagaaaaactaaagcctttcctgaaa
aaatatatggacaatcccaagtatgcgcatgttgaaccaagacggattacagctgaaaac
attcagcacattttggttccgtctaaacagcgtgataaattaaaattgcttcatgaaatg
gtgacgaatgtacagccttatttaggcatcatctttgccaatacaaaaacaactgttgat
gaaatcgcatcgttcctacaagaaaaaggaatgaaaatcggtgtgctccatggcggatta
acgccgcgtgaacgtaaaaaagtcatgaaacaaattgaagatttggagttcacttatatt
gtagcatctgatcttgcagcgcgcgggattgacattaaaggcgtcagccacgtcattaac
tatgaacttccatctgatcttgatttttatgttcaccgcgttggaagaacagctcgtgct
ggttcatctggaattgccatgaccatttatgagctggctgatgaggatgcactcattcaa
attgagaaaatgggcgttgtgtttgaaaacaaaaccattgttcatggcgaatggcgggat
gcagatgaccgcttgaagcgtcaaagacgtaaaaaagcaccaaatgaaatggaagaaaaa
gcgaaacgtcttgtgagaaaaccaaaagccgtcaaacctggatataaaaagaaaatgaca
cgtgagatagataaaatcaaaagacaggaacgtagaaagtcaaagcgtaatggaaagtag
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