Bacillus zhangzhouensis: NF868_10270
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Entry
NF868_10270 CDS
T08887
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bzh
Bacillus zhangzhouensis
Pathway
bzh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bzh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NF868_10270 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bzh03021
]
NF868_10270 (rpoD)
Transcription machinery [BR:
bzh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF868_10270 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
COR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UYO34491
LinkDB
All DBs
Position
complement(2001182..2002303)
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AA seq
373 aa
AA seq
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MADKQAHETETELTFEQVRDKLTETGKKRGVLTYEEIAERMSSFEIESDQMDEYYEYLGE
QGVELISENEETEDPNVQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEITYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaagcccacgaaaccgaaactgaattaacctttgaacaggtgagagat
aagctcactgaaacgggtaaaaaacggggcgttttaacatacgaagaaattgcagagcgt
atgtccagctttgaaattgaatcagaccaaatggatgaatactatgaatacttaggcgaa
cagggtgtagagctcattagtgaaaacgaagagacagaagacccaaatgttcagcagctg
gctaaagcggaagaagaatttgacctgaatgatttaagcgtaccaccaggtgtcaaaatc
aatgatcctgttcgtatgtacttaaaagaaatcggacgcgtcaatttgttatctgctaaa
gaagaaattacgtatgctcaaaagatcgaagaaggcgatgaggaatcaaaaagaagatta
gcggaagcgaaccttcgtctcgttgtcagcattgcgaaacgttatgtcggtcgtggtatg
ctgttccttgacttgattcaagaaggaaacatgggtctgatgaaggcggttgagaagttt
gattaccgcaagggatataaattctcaacatatgcgacttggtggattagacaggcgatc
acacgtgcgattgccgatcaggcgagaaccatccgaatcccggttcatatggtggaaacg
attaataaattgatccgtgttcaaagacagcttctgcaagacctaggcagagaaccaacg
cctgaggaaattgctgaagacatggatttaactccagaaaaggtaagagagattcttaaa
attgcgcaagagcctgtatctttagaaacacctattggtgaagaagatgactcgcatctt
ggtgattttatcgaagaccaagaggcgacatctccatctgaccacgctgcatacgaactc
ttaaaagagcagcttgaagatgtattagacacgctgacggatcgtgaagaaaatgtgctg
agactacgtttcggactagacgacggaagaacacgcacgttagaagaggttggaaaggtg
ttcggcgtaacaagagagcgtatccgacaaattgaagcgaaagctcttcgtaaattaaga
cacccaagcagaagtaaacgattaaaagacttcttagagtag
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