Bacillus zhangzhouensis: NF868_12120
Help
Entry
NF868_12120 CDS
T08887
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bzh
Bacillus zhangzhouensis
Pathway
bzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF868_12120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bzh03019
]
NF868_12120
03009 Ribosome biogenesis [BR:
bzh03009
]
NF868_12120
Enzymes [BR:
bzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NF868_12120
Messenger RNA biogenesis [BR:
bzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NF868_12120
Ribosome biogenesis [BR:
bzh03009
]
Prokaryotic type
rRNA helicases
NF868_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
UYO34835
LinkDB
All DBs
Position
2346594..2348036
Genome browser
AA seq
480 aa
AA seq
DB search
MTLQHFDQYPLSDDLKQALEALHFHTPTPVQHETLSVAFSKQDLIVKSQTGSGKTAAYGL
PICEMVDWAENKPQALILVPTRELAMQVKQDLTSLGRFKRIKAAAIFGKASFQAQKVELS
QKNHIVCGTPGRILDHLEKGTLSLENLKFFVLDEADEMLNMGFIEQVSSIIQYLPPKRIS
MLFSATMSDDMKKLSEQFLQTPKVIEIACEETSVQHISHTVIETEEESKFSLLQRTIVIE
NPDRCIIFCNTQDRVNELTMKLDEWDVPCDKIHGGMRQEDRFDVMDEFKKGEFRYLIATD
IAARGIDVSDMTHVIHYDLPYEKERYIHRTGRTGRAGKSGKTIAFMTKNAKPLIDELKQA
AGIDFQTQPYPTKEEAEKYVESFEEKIETPIQKENKQAGVEKDIMKLYFNGGKKKKLRAV
DFVGTIAKIEGVKFDDIGIITIQDTKTYVDILNGKGPLVLNAMRHTTIKGKQLKVHEARS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacattacaacattttgatcaatatccattaagtgatgacttgaaacaagcgctagaa
gcgcttcacttccatacacctacacccgttcagcacgagacattatccgttgctttttca
aagcaggatttaatcgtcaaatctcagactggcagcggcaagactgcagcatatggtctg
ccgatttgtgaaatggttgattgggctgaaaataaacctcaagccctcatccttgtcccg
acacgagaactcgccatgcaggtcaaacaagacctcacaagcctcggacgattcaaacga
atcaaagccgcagccatttttggaaaagcctcttttcaagcgcagaaagtagagctttca
cagaagaatcatattgtgtgcgggacaccaggccgcattttggatcaccttgagaaaggt
accctttctttagaaaatctcaaatttttcgtgttagatgaagcggatgaaatgctgaac
atgggatttatcgaacaagtctcttctattattcagtatctgccgccaaaacgcatatcg
atgctgttttcagcgacaatgtctgatgatatgaaaaaattgagcgaacagtttttacaa
acaccaaaagtcattgagattgcctgtgaagaaacgtctgtacagcacatctcccacacc
gtaattgaaacagaagaagaatcgaaattctcccttcttcagcgtacgatcgtcattgaa
aatcccgatcgctgcatcattttctgtaatacacaagaccgggtgaatgaactcacgatg
aagctggacgaatgggatgtaccctgtgacaaaattcatggcggcatgagacaggaagac
cgctttgatgtgatggatgaatttaaaaaaggtgaattccgttatctgattgcaacagat
atagcagcccgtggaattgatgtcagtgatatgacacatgtcattcattatgatcttcct
tatgaaaaagagcgctatattcaccggactggtagaacaggcagagcggggaaaagcggg
aaaacaattgcgtttatgacaaagaatgcaaagccgcttattgatgaattaaagcaggct
gccggcatagattttcaaactcagccttatccaacaaaggaagaagcagaaaagtatgta
gaaagctttgaggagaagattgaaacgcctattcaaaaggaaaataaacaggcaggcgtt
gagaaggatattatgaagctttattttaacggcggaaagaaaaagaagctgcgggctgtt
gatttcgttggaaccattgccaaaatagaaggcgttaaattcgatgacattggaattatt
acaattcaagacacgaagacatatgtagatattttaaacggcaaaggccctcttgtgctg
aatgccatgcgccacacaaccattaaaggcaaacagttaaaagtacatgaagctcgttca
taa
DBGET
integrated database retrieval system
