Coraliomargarita akajimensis: Caka_0124
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Entry
Caka_0124 CDS
T01204
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
caa
Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caa03400
]
Caka_0124
Enzymes [BR:
caa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Caka_0124
DNA repair and recombination proteins [BR:
caa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Caka_0124
Prokaryotic type
Caka_0124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ADE53153
UniProt:
D5EL51
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All DBs
Position
complement(151807..153006)
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AA seq
399 aa
AA seq
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MLHPKRSAALAALGDFLPHAGRDYAEGRNTDPGPEQQGAVSRLSPWIRTRMLPEWYVISA
VLERHSASAASKYIDEVCWRTYWKGWLQLRPSIWKDYLLARNDLLDQYADHPDYNNAISG
QTGIDCFDAWAKELTETNQLHNHARMWYASIWVHSLKLPWQLGADWFLRHLLDGDPASNT
LSWRWVTGLHTRGKSYLARPDNIRTYTNNRFRVDADLATKPLALQVPTHPSPTTLQALST
PPQGQRLGLLVTDEDLSSPDWLSEQHDIITTAGYFPQQAYHNQRIANPVINFRRASMKNE
IQGPILQHIGSLLQWIDQHQLDGILLAQPPVGFWDSILPELENALSANGKRIHTTRHPWD
EHFYPQATHGFFRFKQAIPQALEQLNSVCTHHSLSHELA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgctacatcccaaacgttcggcagcactagctgcacttggagactttcttccccacgct
ggacgcgattacgccgaagggcgcaacaccgaccccggccccgagcaacaaggcgccgtt
tcccgcctctccccctggatccgcacccgtatgctccccgaatggtacgtcatctccgcc
gtgctggaacgccacagtgcctctgctgcctccaaatacatcgacgaggtctgctggcgc
acctactggaagggctggctgcaactgcgtccttcgatatggaaagactaccttctcgca
cgcaacgatctgctcgaccaatacgccgatcacccagactacaacaacgccatcagcggc
caaaccggcatcgactgtttcgacgcatgggcgaaagagctcaccgaaaccaaccagctg
cacaatcacgcacgcatgtggtatgccagtatctgggtacacagcttgaaactcccgtgg
cagctcggagccgactggtttctgcgtcacttgctcgatggcgaccccgcctccaacacc
ctcagctggcgttgggtcaccggtcttcacactcgcggcaaaagctacctcgcacgcccc
gacaacattcgcacctataccaacaaccgctttcgcgtcgacgcggacctcgccaccaag
ccactcgcgctccaggtcccgacccacccgagtccgacgacactccaagccctgtcaaca
cctccacaaggtcaacgcctcggcctgctggttaccgacgaggacctgagcagtccagac
tggctgagcgaacaacacgacatcattaccaccgccggctactttcctcagcaggcctac
cacaaccagcgcatcgccaaccccgtcatcaacttccggcgtgccagcatgaagaacgag
atccaaggccccatcttacagcacatcggctcactccttcaatggatcgatcaacaccaa
cttgacggcatcctcctggcccaaccgcccgtcggcttctgggactccatcctgcctgag
ctggaaaacgcactctccgcaaacggcaaaagaattcacaccacccgccacccatgggac
gaacatttctacccacaggcgacccacggcttcttccgtttcaaacaagcgatccctcaa
gcactcgaacaactcaattccgtgtgcacgcaccacagcctcagccatgagctcgcctaa
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