Coraliomargarita akajimensis: Caka_0167
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Entry
Caka_0167 CDS
T01204
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
caa
Coraliomargarita akajimensis
Pathway
caa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Caka_0167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caa03021
]
Caka_0167
03400 DNA repair and recombination proteins [BR:
caa03400
]
Caka_0167
Enzymes [BR:
caa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Caka_0167
Transcription machinery [BR:
caa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Caka_0167
DNA repair and recombination proteins [BR:
caa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Caka_0167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Sec7-like_HDS
Motif
Other DBs
NCBI-ProteinID:
ADE53194
UniProt:
D5ELL9
LinkDB
All DBs
Position
213528..213737
Genome browser
AA seq
69 aa
AA seq
DB search
MRDDYLQQAQEVITDPMILINVVSRRAKQLKSGYKPLIESLERLSAEDMALREIIEGKIT
YQLAEPEEA
NT seq
210 nt
NT seq
+upstream
nt +downstream
nt
ttgagagacgactatcttcaacaagcccaagaggtgatcactgacccaatgatcctgatc
aatgtagtatcgcgtcgtgcgaagcaattgaaaagcggctacaagccattgatcgaatca
cttgagcgtctgtccgccgaagacatggcacttcgtgagattatcgagggcaagatcacg
taccagctcgccgagccggaagaagcctag
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