Coraliomargarita akajimensis: Caka_0268
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Entry
Caka_0268 CDS
T01204
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caa
Coraliomargarita akajimensis
Pathway
caa03030
DNA replication
caa03410
Base excision repair
caa03420
Nucleotide excision repair
caa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Caka_0268
03410 Base excision repair
Caka_0268
03420 Nucleotide excision repair
Caka_0268
03440 Homologous recombination
Caka_0268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caa03032
]
Caka_0268
03400 DNA repair and recombination proteins [BR:
caa03400
]
Caka_0268
Enzymes [BR:
caa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Caka_0268
DNA replication proteins [BR:
caa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Caka_0268
DNA repair and recombination proteins [BR:
caa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Caka_0268
NER (nucleotide excision repair)
GGR (global genome repair) factors
Caka_0268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH
jr-ZPR1
IMS_HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ADE53294
UniProt:
D5ELW9
LinkDB
All DBs
Position
complement(344172..346964)
Genome browser
AA seq
930 aa
AA seq
DB search
MKSLFLLDGMALAYRAHFALIRSPIYTSKGFNTSAIFGFTGTLIELIKSGNPSHLAIVFD
TSAPTERHRIHPEYKANREEMPEDLRSAMPHLDRIAEAFDIPVLKLDGYEADDIIGTLAH
RAEAEGFDEIYMVTPDKDFGQLVTERIKMYRPGRKGDGAEILGVDEVKAKWGIARVDQVI
DMLGLCGDSVDNIPGVPGIGPKTAEKLLAKYDTVEGLLDHVDELKGKQQEKVRDNADQAR
MSKLLATIQKDVPIAVEWSALELHAPEQSKIVPLFTEFEFRTLGKRIFGNDFSVQEAATD
LVLMSEDDEQAAAASSETPAGGQLDLIPAITFKKLADVTHTYAIADTTEQLQRLCTELRE
AGSFAFDSETTALNPRQAELVGLSFATKAHSGWWVPASSEALDALRPLFADNSITKIGHN
LKFDLAILAAQSCPVDGPCYDTMLAHALIEPEQRHNLDTLAEDYLRYSTIRFSELMPDAK
KGSPLDYSSVDPQALADYATEDADVTLQLWECFKPKLEESGQASIFYEIETPLLPVLVAM
ESEGIRLCTETLEETGRVLEGQIATLKDAVYAAAGREFNLNSPKQLGEVLFNELKLVDKP
KKTKTGQFATNEQVLSSLAPKHPIVADLLEYRQLSKLKSTYIDALPNAVDPVSGRVHTHY
GQVQTATGRLSSNDPNLQNIPVRSAQGREIRKAFVPREGWTLLAADYSQIELRILAALTA
DEGLLTAFREGRDIHTATAAKIFEVDADTVSRDQRSTAKMVNFGIPYGISAFGLAQRLGT
VSRTEAQNIIDNYFAQFPGIPGYMQAQQESARAKGYVATVCGRRRYLRDINSGNGTIRAA
AERNAINMPIQGTAADMIKLAMIRVHHAIIDAGLKSRMLLQVHDELIFDLAPGEESALRQ
LVTGGMQDALQLACPIEIEIGTGMNWLEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactcttcctcctcgatggtatggcacttgcctaccgtgcccactttgccctg
atccgcagccccatctatacctcgaagggctttaacacctcggcgatcttcggctttacg
ggcacacttatcgagctcatcaagagcggcaatcccagccacctcgcaatcgtcttcgac
acctcggccccgaccgaacgccaccgaatccaccccgagtacaaggccaaccgtgaggaa
atgccggaagacctgcgcagcgcgatgccgcatctggaccgtattgccgaggcctttgac
attcctgttctcaaactggatggctacgaggcggatgacatcatcggtaccctcgcccac
cgtgccgaggcggagggtttcgatgaaatctatatggtgacccccgataaagactttgga
caattggtcaccgaacgcatcaaaatgtatcgcccgggtcgcaagggcgatggcgcggag
attctgggagtcgacgaagtcaaagcgaaatggggcatcgcacgcgtcgatcaggttatc
gacatgctcggtctctgtggcgacagcgtggacaacattcccggggtccccggtattggc
cccaagaccgccgaaaagttgctggcaaagtatgatacggtcgagggcttgctcgaccac
gtcgatgaactcaaaggtaagcagcaggaaaaagtgcgcgacaacgccgatcaggcgcgc
atgtccaagctgctggcaaccattcagaaagatgttccgattgctgtggagtggagtgct
ctggagctccatgcgcccgagcaatccaaaattgtcccgctcttcacggagttcgaattc
cgcaccctcggcaagcgcatcttcggcaatgacttctctgttcaggaggccgcgaccgat
ttggtcctgatgagcgaggatgacgaacaggccgccgccgcaagcagcgaaacaccagcc
ggcggtcaactggacctcattccggcaatcactttcaagaaactcgcggatgtcacacac
acgtatgcgatcgccgacactaccgagcagctgcaacgcttgtgcaccgagcttcgcgaa
gctggcagctttgcattcgacagtgaaaccaccgcgctgaatccgcgccaggcggaattg
gttgggctttcgttcgcaacgaaagcgcacagcggctggtgggttccagccagcagcgag
gcactcgacgccttgcgtccactctttgccgacaactcaatcaccaagatcggccacaat
ttgaagttcgacctggcaattcttgccgcgcagagctgcccggtggacggcccatgctat
gacaccatgctcgcgcatgcgctgatcgagccggaacagcgtcacaacctcgacacgctg
gccgaagattacctgcgctacagcaccattcgcttcagtgagttgatgccggatgccaag
aaaggcagtccgctcgactactccagtgtcgatccgcaagcgctcgccgactacgccacc
gaagatgccgatgtcaccctgcagctttgggagtgcttcaagccgaagctcgaggaaagc
ggccaagcaagcatcttctacgaaattgagaccccgctcctcccagtgcttgtcgcgatg
gagagcgaaggtattcgtctgtgtaccgaaacgctcgaagaaaccggacgtgtgttagag
ggccaaatcgcaactcttaaagacgcggtctatgcagccgcgggcagagagttcaacctc
aactcgccgaagcaactcggtgaagtgctcttcaatgaactcaaactggtcgacaagccg
aaaaagaccaagaccggccagttcgcaaccaatgagcaggtactctccagtctggcgccg
aagcacccaatcgtcgccgacttactcgagtaccgccaactgtcgaaactcaagagcacc
tacatcgatgcgctccccaacgctgtcgacccagtcagcggacgtgtccacacccattac
ggtcaggtacaaaccgccaccggacgcctgagttcaaacgatccgaatctgcaaaatatt
ccggtacgcagtgcccaaggacgagaaattcgcaaggccttcgttccgcgcgagggctgg
acgcttctcgccgccgactattcgcaaattgagctacgcattctggccgccctgaccgcg
gatgaagggctgctcaccgcattccgtgaaggccgtgacattcatacggcaactgccgcc
aagattttcgaggtcgacgcggacacggtcagccgtgatcagcgcagtacagccaaaatg
gtcaacttcggcattccctacggcatctcggccttcggcttggcgcagcgcctgggaacc
gtcagtcgtacggaggcacagaacatcatcgacaattactttgcacagttccccggtatt
cccggctacatgcaggcccaacaagagagtgcccgagccaagggctatgtggcaaccgtc
tgtggtcgtcgacgctacctgcgtgatatcaattcaggcaacggtaccatccgtgccgca
gccgaacgcaatgcaatcaatatgccgatccaagggaccgcggccgacatgatcaaactg
gcaatgattcgtgttcaccatgcgatcatcgatgccggtctgaagagccgcatgctgctc
caagtgcatgacgagttgatctttgacctcgccccgggagaagaatccgcgctccgccaa
ctggtaaccgggggcatgcaggatgcgctccagctagcctgcccgattgagatcgaaatc
ggcacgggtatgaattggctcgaggcgcattaa
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