Coraliomargarita akajimensis: Caka_0338
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Entry
Caka_0338 CDS
T01204
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
caa
Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caa03000
]
Caka_0338
Transcription factors [BR:
caa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Caka_0338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_24
HTH_34
LOH1CR12
Motif
Other DBs
NCBI-ProteinID:
ADE53363
UniProt:
D5EMF7
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All DBs
Position
complement(392991..393962)
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AA seq
323 aa
AA seq
DB search
MIETIDSRQLLAFCTLVQTGSFTETARELNLTQSAISHSVKNLEEDLRCQLVTRTGRKIH
ITEDGEELYQHAQAILHQMESARTRIQDRANWGRGRLRVGASTTACQYILPIVLREFNEC
FPDCILSITPADTPELLDKIRHHEIDLAIIVDPGSSKDVTVRKLFTDELVLVTSSNHPFA
QKGSTKMTEIAQERLVLYNKTSQTFGAIEQHFRQNKLALQNYIELGSMEAIKELIKINYG
VSYLASWSVENEVNMGSLARITTGPRKITREWGICYANEKKLSITEETFLGICESVASAL
QPQMSPAPAKKPAKKKAKAKTKR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaacaatcgatagtcgacagctcctcgccttctgcacgctcgttcaaacgggc
agctttaccgagaccgcccgcgaactgaatctaacacagtccgccatcagccactccgtg
aaaaatctggaagaggatttacgctgccaattggtcactcggaccgggcgaaaaatccac
attaccgaagacggggaagaactctaccaacatgcgcaagccattctacatcaaatggaa
agcgcacgcacacgcattcaggatcgcgccaattggggccgcgggcgactgcgtgttggc
gcaagcactactgcctgccaatacatcctgccgattgtcctgcgcgagttcaatgaatgc
ttcccggattgcatcctcagcatcacccccgcagacacccctgaactcctcgacaagatc
cgccaccacgaaattgatttggccatcattgtggaccccggcagctcgaaggacgtcacg
gtacgaaaactttttaccgacgaattggtattggtcacttcctccaatcatccctttgca
caaaaagggagcacgaaaatgaccgaaattgctcaagagcgtctggttttgtacaataag
accagtcagaccttcggggccattgagcagcacttccgccaaaacaagctcgccctgcag
aactacatcgagctgggcagtatggaagcgatcaaggagttgattaagatcaactatggc
gtcagctacctcgcctcctggagtgtggaaaacgaagtcaacatgggcagcctcgcccgt
atcaccaccggaccgcgtaaaattacccgcgaatggggtatctgctatgccaacgagaaa
aaactctccatcaccgaagaaaccttcctcggcatctgcgaatccgtagccagcgcccta
caaccgcaaatgtcccccgcaccggccaagaagcccgccaagaagaaagcgaaagcgaag
acaaagcgttaa
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