Coraliomargarita akajimensis: Caka_1207
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Entry
Caka_1207 CDS
T01204
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
caa
Coraliomargarita akajimensis
Pathway
caa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Caka_1207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caa02000
]
Caka_1207
Transporters [BR:
caa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Caka_1207
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADE54227
UniProt:
D5EIG1
LinkDB
All DBs
Position
complement(1520080..1521861)
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AA seq
593 aa
AA seq
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MLWMLWLTGCGEAPEIVRGQYPLPAGAAIIDAEPGEYGGIFVLNETSQPTTFNPQVPNNL
STSMILGRLLSSLVDFDPRTETFIPALAEGWTVSDDKLSYTFTLREGLLWSDGQPITADD
VVFTFDCILADEIDPKTGNATPRYPSRYYEQYHINGEKLRYTKLDSRTIRFDLPTVYAPF
IYDISQPILPKHVLGESFEDGSFLKQWTTQVAIEDPGALVASGPFVVNSYRPGERLVLTP
NPHFWKADRAGQRLPYVDYLIYKFVSDSNTSIAHFATGKSDASGIGADDYEWVKQAVDTY
DFTIHERGPSASVNFFWFNQHRGANEDGEPYVSAHKLRWFTDKRFRQAVQYGLNRQGLID
ALLFGKGEPLTSIIPPAQGKWHNPNLPRYDFDPEKSRELLRESGFSWRDDGQLIDVEGIP
VEFELLLVESPFFDKIGVTFVENMKELGMQVVILRADFATLLARTDSTFDYDITILGWGS
SSAAYDPSGSKALYLSSGVYHQWYPEQSEPATEWEARIDELIGLQERTLDIEKRYEMMHE
VQAILAEELPLLYCFTPYGYVGIKDKWHNVYVPKAGTTLWNLEELWTEQGEDD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctctggatgctgtggttgaccggctgtggtgaggctccggaaattgtgcgcggccag
tatccattacccgcgggcgccgctattatcgatgccgagcctggggaatatggcgggatc
ttcgtgctgaatgagacctcacagccgaccacgtttaatccgcaagtgcccaacaacctg
agtacgagcatgatacttgggcgtttgctgtcctcgctggtggattttgatccgcgcacc
gagacctttatcccggccttagcggagggctggacagtgagtgacgataaactgagctat
acctttaccttgcgcgagggcttgctctggagcgatggtcagccgatcacggcggacgat
gtggtgttcacttttgactgtattctcgccgatgagatcgaccccaaaacgggcaatgcg
acgccgcggtatccatcccgttactacgaacaataccacatcaatggtgagaagttgcgc
tataccaaactggactcgcgaacgattcgttttgatctgccaacggtgtatgcgcccttt
atctatgacatttcccaaccaatcctaccgaagcatgtgttgggcgagtcctttgaagat
ggcagcttcctgaagcagtggaccacgcaggtggcgattgaggatcccggcgcgttggtt
gccagtggcccgttcgtggtgaactcgtatcgccccggagagcgcttggtactgacgccg
aatccacatttttggaaggccgacagagcggggcagcgactgccttatgtggactatttg
atctacaagttcgtgtcggactccaatacctcgatcgctcactttgccaccggcaagagt
gatgcttcgggaatcggtgccgatgactacgaatgggtgaagcaggcggtcgatacctat
gatttcaccattcacgagcgtggtccgtcggcgagtgtgaatttcttctggttcaaccag
caccgtggagccaatgaggacggtgagccctatgtatccgcacataaattgcgctggttt
acggataagcgcttccgtcaggcggtgcagtacggactgaaccgtcaggggctgattgat
gccctgttatttggcaaaggggaaccgctgacatcgattattcctccggcacagggcaag
tggcataatccgaatttaccgcgctatgacttcgatcctgagaaatctcgtgaactcttg
agggagtccggtttcagttggagagacgacggccaattgatcgatgtggaagggataccg
gtcgagtttgagctcctgttggtggagagtccgttctttgataagatcggtgtaaccttc
gtggaaaatatgaaggagctcggcatgcaggtggtgatcttgcgtgctgactttgcaacc
ttactggcgcgtaccgatagtaccttcgattacgacattacgattctcgggtggggatcg
tccagtgcggcctatgatccgtccggaagcaaggcgctgtatttgagcagcggtgtctac
caccagtggtaccccgagcagtcggagcccgcgaccgagtgggaggctcgtattgacgag
ttgattggtttgcaggagcgaaccctggatatcgagaagcgctacgagatgatgcatgag
gtgcaggcaatcctcgcggaagagttgccgctgttgtattgcttcacgccctacggctat
gtgggcatcaaggataagtggcacaatgtctatgtacccaaggcagggacgacgctttgg
aatttagaagagctgtggactgaacaaggggaggacgactag
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