Coraliomargarita akajimensis: Caka_1320
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Entry
Caka_1320 CDS
T01204
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
caa
Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caa03009
]
Caka_1320
Enzymes [BR:
caa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Caka_1320
Ribosome biogenesis [BR:
caa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Caka_1320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
RRP40_N_mamm
Motif
Other DBs
NCBI-ProteinID:
ADE54340
UniProt:
D5EIU1
LinkDB
All DBs
Position
1665372..1666103
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AA seq
243 aa
AA seq
DB search
MTEVEKQRIQKLIANAGLCSRREAERLIEDGKVRVNGKIAQLGDKARISDDIFVNNKPLN
KHVERSVTVLMNKPKGVLCTNSDPHADRTVFDLLPLDLQRQRMFCAGRLDKDSEGLLVLT
NDGDLAHRITHPTSNVVKRYRVVLHRDFDKADIPKLLNGVDYEGDFLKAEKVIPAPAVGE
GHLRRLEVHLHHGKKREIRRLFEANRYYVKKLVRVQIGGMVLKNMPKGGIKVLGKKDIER
LFA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagttgaaaaacaacggatccaaaagctgatcgccaacgctgggctctgctcc
cgacgtgaagcagaacgcctgatcgaggacggtaaggtccgtgtgaacggtaaaattgct
caactcggcgacaaggcacgcatctccgacgacatcttcgtcaacaacaagccgctcaac
aaacatgtcgaacgctcggttacagtcctaatgaacaagccgaaaggagtgctctgtacc
aactccgacccacatgcggatcgcacggtcttcgacctgttaccactggatctccagcgt
cagcgtatgttttgcgcggggcgcctcgataaggacagtgaaggcctgcttgtcctcacc
aatgatggcgacttagcccatcgcatcacccacccaacctccaatgtcgtcaagcgctac
cgtgtggttctccaccgcgacttcgataaagccgacattcccaagctgctcaacggcgta
gattacgaaggcgattttctaaaggccgagaaagtaatcccagcacccgctgttggcgaa
gggcacttgcgccgcctggaagtgcacctacaccatgggaagaagcgtgaaatccgccga
ctcttcgaagccaatcgctactacgttaagaagctcgtccgagtacagattggtggcatg
gtcctgaaaaacatgcccaaaggtggcatcaaagtcctcggcaagaaagacatcgagcgc
ctgttcgcttga
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