Coraliomargarita akajimensis: Caka_1413
Help
Entry
Caka_1413 CDS
T01204
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
caa
Coraliomargarita akajimensis
Pathway
caa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Caka_1413
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caa01007
]
Caka_1413
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caa03016
]
Caka_1413
Enzymes [BR:
caa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Caka_1413
Amino acid related enzymes [BR:
caa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Caka_1413
Transfer RNA biogenesis [BR:
caa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Caka_1413
Prokaryotic type
Caka_1413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ADE54432
UniProt:
D5EJ33
LinkDB
All DBs
Position
complement(1764369..1766828)
Genome browser
AA seq
819 aa
AA seq
DB search
MKISYNWLKNYIDLDPVEHTPEVLAEVLPLLGFDIEEYEKLGPPQFENVVVGQVLEYDQH
PDADRLRCCLVNTGQEGEPHKIVCGAKNFNAGDKVMVALPGAVLPGDFKIKKSKLRGQPS
EGMMCSAKELKIGQDHDGIMILDPEVALGTPVNDLYQDGDTVFDLEITPNRVDVLSHLGV
ARELSARFGLPVKYPEVKASTQNAANGDSLLSEVEVSAPEFCPHYTAMCIKGVNVGPSPK
WLKDAIEATGQRSINNVVDVTNYVLHETCQPMHAFDAAKIKGGKLVVRMAGEGEQITTLD
EKERTLTAEMGVIADGERPLVVAGVMGSVDAEVDEGTTDVVLEVAYFNPTSVRATARKLN
LSSDSSYRYERGVDPKGAVYASLRAVDLILEVAGGTVDGDMMVEGAEPATISEVELRPDH
LRRFIGFDVSDDEVQAVLESLELSVSRHDEADGSQRWVVGIPSFRGDLQRDVDLIEEFVR
VYGTDRIPESEVVARGIKENDHRIYTVNAAVADYLTGQNFDEAFLYSLRDPEETKFFFGE
ESFKVLALDNPLQSDQSHLRPSLIPGLLDVLKLNSARGTGATRFFERGHVYREVKGKMME
LISVGFVIVADQVSREWRQREVADFYTARTLSGNILEIAGQAASKLSYQPIGECKLWQGG
HAAYAGDFTRMGFEVTCGLLNVATLKDRWDLATPVIAGSILMTPKFFERKAKRGRHSGVS
NQPASAKDLALIVDESVLAGQVQNDVAKFAKKAAQGFACESVRVFDVYQGDGLPEGKKSL
AVSMSFRAADRTLKDKEVNAAFDGIQKLITEKTDYQIRK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttcctacaactggcttaaaaactacattgatcttgatccggtcgagcacaca
ccggaggtgttggctgaggttctgccactgcttggttttgatatcgaggagtacgaaaag
cttggtccgccgcagttcgaaaacgtggtggttggccaggttttggaatacgatcagcac
ccggatgcggaccgtttgcgctgttgcttagtcaacactggccaagaaggtgagccgcac
aaaatcgtgtgtggtgcgaagaactttaatgcgggtgataaggtcatggttgctctgccg
ggtgccgtactgccaggggactttaaaattaagaagtccaaactgcgcggtcagccgtcc
gagggcatgatgtgttctgccaaggagctgaagatcggtcaggatcacgacggtatcatg
atcttggatccggaagtcgcactcggtactcccgtaaacgatttgtatcaggacggcgat
acggtcttcgatttagagatcacgcccaaccgtgttgatgtgttgagccatctgggtgtc
gcgcgtgagttatctgcccgcttcggtcttccggtcaagtatccggaagtgaaggcgagt
acgcagaatgccgcgaatggcgattcgctgttgagcgaagtcgaagtcagtgcgcccgaa
ttttgtccgcactacactgcgatgtgcatcaaaggcgtgaacgtcggtcctagtccaaag
tggctgaaggatgcgattgaggctacaggccagcgttcgatcaacaacgttgtcgatgtc
accaattacgtgctgcatgaaacctgtcagccgatgcatgccttcgatgccgcaaagatc
aaggggggcaaactcgtggtgcgcatggcgggtgaaggcgaacagatcacgacacttgac
gaaaaagagcgcacgctgactgcagagatgggagtcatcgcagatggcgaacgtccgcta
gtggtcgccggcgtgatgggttcagtggatgccgaagtcgatgaaggcacaaccgacgtt
gtgttggaagttgcgtatttcaacccgacttcggtccgtgcgacggcccgcaagttgaac
ttatcctctgacagttcctatcgctatgagcgtggtgttgatccgaagggggcggtgtat
gcctcactgcgcgcggttgacctgattctcgaagtggccggtggtacggttgacggtgat
atgatggttgagggcgcggagcctgcaacgatttccgaggtcgaactacgtcccgaccat
ctgcgtcgtttcattggtttcgatgtcagtgacgatgaagtacaggcagtgcttgagtcg
ttggaactcagcgtatcccgtcatgatgaagcggatggttcgcagcgctgggttgtcggt
attccgtccttccgtggggacctgcagcgcgatgttgatttgattgaggagtttgtccgt
gtctatggcacagaccgtattccggaatccgaagtggtcgctcgtggcatcaaggaaaac
gaccaccgtatttacacggtgaatgcagcggttgccgattatctgaccgggcagaacttt
gatgaggccttcctttattcgctgcgtgatccggaagaaaccaagtttttctttggtgag
gagagcttcaaggtcttggccttggataacccattgcaaagcgaccagagccatctgcgt
ccatcactgattcccggcctgctggatgtcttgaagctcaattctgcacgcggtaccggt
gcaacccgcttcttcgagcgtggacatgtgtatcgcgaggtgaaggggaagatgatggag
ctgatttcggttggctttgtgatcgtcgctgaccaagtgagccgtgaatggcgtcaacgc
gaagttgcggacttctacacggcccgcacgctgagtggtaacattctcgaaattgccggg
caggcggcgagcaagttgagctaccagccgattggcgaatgcaagctttggcaaggcggc
cacgcggcctatgcgggtgatttcacacgtatgggtttcgaggtgacctgcggtttgctg
aatgtggcgaccctgaaagatcgctgggacctcgcgacgccggtgatcgccggatcgatt
ttgatgacgcccaaattcttcgagcgcaaggcgaagcgtggtcgtcattcgggagtgagt
aatcaaccggcctctgcgaaagatttagccctgatcgtggatgaatcagtgctcgccgga
caggttcaaaacgacgtggcgaagtttgcgaagaaagccgctcagggctttgcttgtgag
agcgtgcgtgtctttgatgtctatcagggcgatggcttgccggaaggcaaaaagagtctc
gcagtgagcatgagcttccgtgctgctgaccgtacattgaaggacaaggaagtgaatgct
gcattcgacggtatccaaaagctgattacggagaagacagactaccagattcggaagtag
DBGET
integrated database retrieval system
