Coraliomargarita akajimensis: Caka_1548
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Entry
Caka_1548 CDS
T01204
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
caa
Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caa03019
]
Caka_1548
Messenger RNA biogenesis [BR:
caa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Caka_1548
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Apolipoprotein
SUKH-3
Motif
Other DBs
NCBI-ProteinID:
ADE54567
UniProt:
D5EJG8
LinkDB
All DBs
Position
1920975..1921958
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AA seq
327 aa
AA seq
DB search
MPDYKTVQEVKAIDPALAAPFRSILILRRKTTKTAKNGNPFLSIELGDAGGSFTANCFGD
SAIYKALEPVAEGSIIRVSGKTEYYQERFSPRLQAAEVIDAEEASAEGMMANLVETPPES
EEELWQHIQEAVEAIQHPQLKETVQRVLEELGERFRTCPAAVSMHHAYYNGLLEHTTHMV
RAARALLPLYPEVDHDLAIAGIILHDMGKLEEYEGEFAAKVSRIGTLQGHVVIGFRIARK
AALQSKLNADLTERLEHIILSHQGEKEWGAAAMAATPEAVFVSMVDNLDAKMGMVQRVLR
NTPEGEAFSDYLAGLQTRVLVTPPDKS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactacaaaaccgttcaagaggttaaagccatcgaccccgcgctcgccgccccc
tttcgctcgatactgattctgcggcggaagacgactaagaccgcgaagaacggcaacccc
ttcctcagcattgagctaggcgatgcgggaggtagttttaccgccaactgtttcggagac
tccgcgatctataaggcactcgaacccgttgctgaaggctctattatccgcgtcagcggc
aaaaccgagtattaccaggaacgtttttcccctcgcctacaagcggctgaagtcatcgat
gccgaagaagcgagtgcagaggggatgatggccaatctggtcgaaacacctcctgaatcc
gaggaggagctctggcaacatattcaggaagccgtcgaagccatccaacacccgcaacta
aaggagaccgtccaacgtgtcctggaagagctcggcgagcgcttccgcacctgccctgcc
gcagtgagcatgcaccacgcatactataacggcctactggaacataccactcacatggtc
cgggccgcacgcgccctacttccgctctatcctgaagttgaccacgatctggcaatcgcc
ggcatcattcttcacgacatgggaaagctggaagaatacgaaggtgagttcgcagctaaa
gtcagtcgcattggcaccctgcaaggacacgtcgttatcggctttcgaattgcgcgcaag
gcagcactgcaatccaaattgaatgccgacctcacggagcgcctcgaacatatcattcta
agccatcagggtgaaaaggaatggggtgccgccgcaatggcagcaacccctgaagcggtc
ttcgtatcgatggtcgataacctggatgccaaaatgggaatggttcagcgtgttctgcgc
aatacgccggaaggcgaagccttctccgattatcttgcaggcctgcaaacccgcgtactg
gttacacctccggataagagctga
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