KEGG   Coraliomargarita akajimensis: Caka_1612
Entry
Caka_1612         CDS       T01204                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
caa  Coraliomargarita akajimensis
Pathway
caa02024  Quorum sensing
caa03060  Protein export
caa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:caa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Caka_1612
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Caka_1612
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Caka_1612
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caa02044]
    Caka_1612
Enzymes [BR:caa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Caka_1612
Secretion system [BR:caa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Caka_1612
  Eukaryotic Sec-SRP protein
   Caka_1612
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA CLP1_P AAA_22 Zeta_toxin 6PF2K nSTAND_NTPase7 cobW AAA_33 ResIII TctA AAA_16 Arf AAA_24 Pox_A32 AAA_18
Other DBs
NCBI-ProteinID: ADE54631
UniProt: D5EJN2
LinkDB
Position
1992190..1993551
AA seq 453 aa
MLENLTDKLGSALRNLRGVGKLTEENMEEALKEVRKALLSADVHFKVAREFVSNVKEQCV
GQEVLKSVTPGQQVIKIIHDELVKLLGEGTTELEDKKPLRIMMVGLHGSGKTTSSGKLAN
YLAKKRDYRPALIACDVYRPAAIDQLETLSQTVGCEFYGDREEKNVVTIGKRGLEAAKAA
DANLIIFDTAGRLQIDEDLIEEIKDLKAAVQPDEVLLVADAALGQEAVNVAKHFHEAVDV
TGIILTKLDGDARGGAALSMKTITDTPIKFMGIGEKVDEFDVFHPDRMASRILGMGDVVS
LVEKAQETIDQDEAERMAEKMRKAEFDLNDFLKQMQQVKKMGSLGSIVSMLPGASGIEIG
DEEEKKMARTEAIILSMTPKERSQPRLLKGSRLKRVAQGSGVQVREVNALLKQFGQMQKM
MKMMRGGKGRKMMKAMKAHMQENGESLPNMPNL
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgctcgagaatttgacagataaactgggaagcgcacttcgcaatctacgcggagtcggt
aagctgaccgaggagaacatggaagaggcactcaaggaagtgcgcaaggccctactctcc
gctgacgtccacttcaaggtcgctcgcgaatttgtatccaatgtcaaagagcaatgcgtc
ggtcaggaggttctcaaatccgtcactccgggccaacaggtcattaagatcatccatgat
gagttggtgaagctactcggcgaaggcacgaccgaactggaagacaagaaacctctgcgt
atcatgatggtcggtctgcatggctcgggtaaaaccaccagctcgggcaaactggcgaat
tatctggcgaaaaagcgcgactatcgccccgcactgatcgcgtgtgacgtgtaccgacca
gccgcgattgaccagctagagaccctatcccaaacggttggctgcgaattctacggcgat
cgcgaggaaaagaatgtggtcacgatcggtaagcgtggcctcgaagccgccaaagcagcc
gatgccaatctgattattttcgacactgcaggccgcctgcagattgacgaggatttgatc
gaggagatcaaggacctcaaagccgccgtgcaacccgacgaagtcctcttggttgccgac
gccgcgctgggccaggaagcggtcaatgttgccaaacacttccatgaagcggtcgacgtc
acgggcatcattctcaccaagctcgatggtgacgcccgcggtggcgcggcgctgtcgatg
aagacgattaccgacaccccgattaagttcatgggtatcggtgaaaaggtcgacgaattc
gacgtctttcacccggaccggatggcctcccgcattctcggcatgggtgatgtcgtctct
ctggtcgaaaaggctcaagagaccatcgatcaggacgaagccgagcgcatggccgaaaaa
atgcgcaaagccgaattcgacctgaatgacttcctcaagcaaatgcagcaggtcaaaaag
atgggctccctcggctccatcgtcagtatgctaccgggtgccagtgggatcgaaatcggc
gatgaagaggaaaagaagatggcccgcaccgaagccatcatcctgtcgatgacgcctaaa
gaacgcagccagccgcgcctactcaaaggcagccgccttaagcgtgtcgcccagggttca
ggtgttcaggtccgggaggtcaatgcgctgctcaagcaattcgggcaaatgcagaagatg
atgaaaatgatgcgcggcggcaaaggccgtaagatgatgaaggccatgaaagcccacatg
caggagaatggcgaaagcctgccgaacatgccgaacctctaa

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