Coraliomargarita akajimensis: Caka_1836
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Entry
Caka_1836 CDS
T01204
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
caa
Coraliomargarita akajimensis
Pathway
caa02024
Quorum sensing
caa03060
Protein export
caa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Caka_1836
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Caka_1836
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Caka_1836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
caa02044
]
Caka_1836
Secretion system [BR:
caa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Caka_1836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
MMPL
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
ADE54854
UniProt:
D5EKA5
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Position
complement(2224523..2227087)
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AA seq
854 aa
AA seq
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MSGNILWKFILTVAIILWCIASITPLQDRPFEDYIISQATANADEFEAIVERAHLRVEES
RDAEGKTSKTLFIALREIGQEEAIDYASFFPEVNLTDVANQNKRNNILLKHMLKTAQSQL
RLGLDLKGGVGVTMKVDEAATEGMSQFQQAEQLKDAIRIMGDRLDGSGVAEPIIRPKGDT
AIEIQMPGLSTKENPEIIDVIKKPARLEFRSVHPSKTPYNTAKEDYPSPYEYEVLVMENE
DRKTGQVAETEMFIKRIPEATGEIVKDAYAYPNQAGGFEIHLEMTDEGSDVLRSVTERMV
GKPLAIVLDGKLYSAPTVNSVLSKNAQITGSFSQREAIDLANVLNNPLALPLAVDEMYEV
GPSMAEDARDSSINAVKVGATLVVLFMVAYYFIGGLVAVISALINVVIVLGVLASLGATL
TLPGVAALVLTLGMGVDANILIFERLREELKAGKTIKNAAAGAFQKVTSTIVDANVTTLI
TACILIWLGTGPVKGFGYTLAIGICASIFCALIVTRFMIDFLVYRLNMSKVLGLNFGGNF
NIDFFKFRKPAFIASWLLVAAGVVSVVIHHDNIMGIDFTGGDEMTIAFDERIAASELNVA
AEELELGEVNPVYQTLIGSGEEVLKIQTRFDQSRDVLVGLQAAFPSANLQEVGMNQIGAS
VSNDIQWNALWSVVAALGGILLYVAFRFEVGYGVGAVVATIHDVLMTVGVFVLCGELGIF
VSGQFSAPMLAAILMIVGYSINDTIVVFDRIREELELNPGAGLRHIINMAISRVFSRSLL
TSITTLLAAVSLYIFGAGVINDFSFVFIIGILTGTFSSIFIASPVFYWWHKGDRRHVEER
ELTPKKYEWEAEEA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtaacattctctggaaattcattctcactgtcgcaatcatcctctggtgcatt
gcgagtatcactccgcttcaggaccgtcccttcgaggattacattatttcgcaggcgact
gccaatgcggatgagtttgaggcgattgtcgagcgggctcatttgcgtgttgaagagagt
cgtgatgcggagggtaaaacttccaagacactgttcattgcgttgcgtgaaattggccag
gaggaggcaattgattacgccagcttcttccccgaggtgaatctcacagatgtcgcgaat
cagaataagcgtaacaacattctactgaaacatatgttaaagaccgcgcagagccagctg
cgcctcggtctcgacctcaagggaggggttggtgtcaccatgaaggtggacgaagccgcg
acggagggaatgtcgcaattccagcaagcggaacagctcaaggatgcgattcgtatcatg
ggggatcgcctggatggttccggtgttgctgagccaattatacgtcctaagggcgatact
gcgatcgagattcagatgccgggtctgtctacaaaggagaatccggagatcattgatgtc
attaagaagcctgcacgtctggagtttcgttcggtgcacccgagcaagactccgtacaac
actgccaaggaagactatccttcgccctatgagtatgaagtgctggtgatggagaatgaa
gaccgtaaaaccgggcaggtggctgaaacagagatgttcatcaagcgtattcctgaggcg
accggtgagatcgtgaaggatgcctacgcatatccgaatcaggcgggtggttttgaaatc
catctcgagatgaccgatgaaggctctgacgtcttgcgttcggttactgagcgtatggtg
ggtaagccgttggcgatcgtccttgatggtaaactgtattctgcaccgacggtgaacagc
gtactttccaagaatgctcagattacaggtagcttctcccagcgtgaagcgattgatttg
gcgaatgttttgaacaatccattggcactgccacttgcggtcgacgagatgtatgaagtt
ggcccgtcgatggccgaggatgctcgcgacagttcgatcaatgcggtgaaagtcggtgca
acactggtggttctctttatggtggcttactacttcatcggtggcttggttgcggtgatt
tccgctctgatcaacgtggtgattgttttaggcgttcttgccagccttggtgcgacgctg
acccttccaggtgtagcggccctggtgctaactttgggcatgggtgtggatgccaatatt
ctgattttcgagcgcctgcgcgaagaattgaaggctggtaagacaatcaagaatgcggcg
gcgggcgctttccagaaggtgacgtcgacgattgtggatgcgaacgtgaccaccttgatt
actgcatgtattttgatctggctgggtacggggccggttaagggcttcggctataccttg
gcgatcggtatttgtgcgtcgattttctgtgcattaatcgtgacccgtttcatgatcgat
ttcctggtttaccgcctgaatatgtccaaggtgcttggtctgaattttggaggtaatttc
aatatcgatttcttcaagttccgtaagccggcgttcattgcttcctggcttctggttgcc
gcgggtgtggtgagcgtggtgattcaccacgacaacatcatgggtatcgactttaccggt
ggtgatgaaatgaccattgctttcgacgagcgcatcgctgcgagtgagttgaatgtcgcg
gctgaagaacttgagctgggtgaagtgaatccggtgtatcagaccttgatcggttcggga
gaagaggtcttgaagattcaaacacgtttcgatcagagtcgcgatgtgctggttggtttg
caggcggcattcccctcggctaatttgcaagaagtcggcatgaatcagattggtgcatcc
gtctccaatgatattcaatggaatgcactctggtctgtggttgcagcactcggaggtatc
cttctctacgttgctttccgcttcgaagttggctacggtgttggtgcggtggttgccacc
attcacgacgttctgatgacagttggtgtctttgtactctgtggcgaactcggtatcttt
gtgagtggccagttctccgctccaatgctggcggcgattctgatgatcgtgggttactcg
atcaatgataccatcgttgttttcgaccgtatccgtgaagaacttgaactgaatcctggg
gcgggtcttcgccacatcattaacatggcgatcagccgtgtgttctcacgttctttgctc
accagtatcaccaccttgcttgcggcggtgtcgctgtacatcttcggggctggtgtgatc
aatgatttctcattcgtcttcattatcggtattctgactggtactttctcctctatcttt
attgccagcccagtattttactggtggcacaaaggagatcgtcgtcacgtcgaagagcgt
gagttgaccccgaagaagtacgagtgggaggctgaggaagcctaa
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