Coraliomargarita akajimensis: Caka_2322
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Entry
Caka_2322 CDS
T01204
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
caa
Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caa03016
]
Caka_2322
Enzymes [BR:
caa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Caka_2322
Transfer RNA biogenesis [BR:
caa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Caka_2322
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
STI1-HOP_DP
Motif
Other DBs
NCBI-ProteinID:
ADE55339
UniProt:
D5EMU9
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All DBs
Position
2845136..2846296
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AA seq
386 aa
AA seq
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MITTTEALREAVRRAQDAGAVGVDTEFVWDRTYYPTLGVVQLGYPDGHCELIDAPEIEDW
SPLAELMSDPNVVKILHDAQQDLTILRRVCGSDPKTIFDTQLTAGFIGLSSTISLRDILK
TLLKVRLAKTETQSDWVARPLTEAQIKYAEDDVRDSVRLMEQILKRADALGRREWIENEM
TYYEDAAIYEERDPDTEMPRVRGSGALTHQQRNVLRALGSWREWTARRRNLPRSFILSDD
AIVSLTKRLPKSAEAIKPMKGLTERVLQRNRSRIWEAIQRGIDGELPELQLGKFNGIQPD
DGYEARVDMALAFVKGTCLAAKIDPPLIGNRAEISALVLDIELADAERHRLLRGWRASFM
GEPMLKLMRGEGALTVDPETNFPKLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattacgaccacagaagcccttcgagaagccgtgcgtagagcgcaggatgctggtgct
gttggggtggataccgaatttgtttgggatcgcacctactatccaacgctgggggtcgtt
caattaggctacccggacgggcactgtgagcttattgatgcgccggaaatcgaggattgg
tcgccgctggcggagctgatgagtgatcccaatgtggtcaagattctgcatgatgcgcag
caggatctgaccatcttgcgccgagtgtgcgggagtgatccgaagactatttttgatacc
cagctcactgctggattcattggcctgtcgtcgacgatatccctacgggacattctcaaa
accctcttgaaagtgcgtctggcgaagactgaaactcaatctgactgggtcgcgcgtccg
ctgacagaggcgcagatcaagtatgctgaagatgacgttcgcgattcggtacgcttgatg
gagcagattctcaagcgcgcggatgcgttggggcgccgcgagtggattgagaatgaaatg
acctattatgaggacgcagcgatctacgaggagcgcgacccagacactgaaatgccgcgt
gttcgtggtagcggcgcgctgacgcatcagcagcgcaatgttctgcgggcactgggttct
tggcgagagtggaccgcccgccgtcgcaatttgccgcgtagctttatcttgtctgatgat
gcgattgtctcgctgaccaagcgcttgccgaagtccgccgaggcgatcaagccgatgaaa
gggctgacagagcgtgttttgcagcgaaatcgctctcgaatctgggaggcgattcagcgc
ggtattgacggagaattgcccgaattacagttgggtaagtttaatgggattcagccggac
gatggctatgaggcgcgtgtcgatatggctttggcctttgttaaggggacttgtttggca
gcgaagattgatccaccgctgattggtaatcgggcggagatttcggctcttgttttggat
atcgagttggctgatgcggagcgacatcgtctcctacgggggtggcgagcgtcattcatg
ggtgagcccatgttgaagttgatgcgcggagaaggcgccttgacggtcgatccagagacc
aatttcccgaagttgagttaa
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