Coraliomargarita akajimensis: Caka_2407
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Entry
Caka_2407 CDS
T01204
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
caa
Coraliomargarita akajimensis
Pathway
caa00260
Glycine, serine and threonine metabolism
caa00630
Glyoxylate and dicarboxylate metabolism
caa00670
One carbon pool by folate
caa00680
Methane metabolism
caa01100
Metabolic pathways
caa01110
Biosynthesis of secondary metabolites
caa01120
Microbial metabolism in diverse environments
caa01200
Carbon metabolism
caa01230
Biosynthesis of amino acids
caa01240
Biosynthesis of cofactors
caa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Caka_2407
09102 Energy metabolism
00680 Methane metabolism
Caka_2407
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Caka_2407
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Caka_2407
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Caka_2407
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Caka_2407
Enzymes [BR:
caa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Caka_2407
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
Nro1_C
Motif
Other DBs
NCBI-ProteinID:
ADE55423
UniProt:
D5ENE7
LinkDB
All DBs
Position
complement(2938234..2939514)
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AA seq
426 aa
AA seq
DB search
MTTENASNALNPNPLASADPEIAAAIAAERKRQESHIELIASENFTYPAVIEAQGTVLTN
KYAEGYPGKRYYGGCEHVDVIEQIAIDRAKALFGADHANVQPHSGSQANAAVYLSVLEPG
DKILTMNLSDGGHLTHGHPMNFSGMHYEVVNYGVGVDNGLIDYDGIADTARAEKPKMITV
GASAYSRIIDFKRMGEIAREVGAYLMADIAHIAGLVATGVHPSPIEHADFVTTTTHKTLR
GPRGGLILCKEAHKKKIDSAVFPGTQGGPLMHVIAGKAVCFKEAASAEFKAYQEQVAANA
KALANALIAKGHHIISGGTDNHLMMIDLRKKNEDLTGKVAQISLDQANITANKNTVPGET
RSPFQTSGIRLGTPAVTSRGMKEADMEKIAEAIDIVLNAPEDETAIAQARAIALELCKAN
PLPYAG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagaaaacgcatccaacgcgctgaatccaaacccgctcgcaagcgccgatcct
gaaatcgcagccgctatcgcagctgagcgtaaacgccaggagtcacatatcgagctaatc
gcttcggaaaacttcacctaccctgccgtcatcgaggcgcaaggtactgtcttgaccaac
aagtatgccgaaggctatccgggcaagcgctactacggtggctgcgagcatgttgatgtg
attgaacaaatcgcgatcgatcgtgcaaaagctctgttcggcgcagaccacgcaaacgtt
caaccacactccggtagtcaggcgaacgcagcggtctatctctccgtgctagagccggga
gataagatcctaaccatgaacctctccgacggcggccacctgactcacggccacccaatg
aacttcagcggtatgcactacgaagtggtcaactacggggtgggcgttgacaacggtctg
atcgactacgacggcatcgccgacaccgcacgtgccgagaaaccaaaaatgatcaccgtc
ggggcatctgcctactcacgcatcatcgacttcaagcgcatgggcgaaattgcccgtgaa
gtgggcgcttacctcatggccgacatcgcacacatcgcaggtctggtggcaaccggcgtc
cacccgtcaccaatcgagcacgcagacttcgtcaccaccacgacacacaagaccttgcgc
ggtccgcgtggtggcctgattctttgcaaggaagcgcataaaaagaagattgattccgcc
gtcttcccgggtacccaaggcggcccactgatgcacgtcatcgccggcaaggcagtctgc
tttaaggaagccgcctctgcggaattcaaggcctaccaagaacaggtcgctgccaacgcc
aaggcgctggccaacgcactgattgccaagggtcaccacatcatcagcggaggcaccgac
aatcacttgatgatgatcgacttgcgcaagaagaatgaagacctgactggcaaagtcgca
caaatctcgctggatcaggcaaacatcactgccaacaagaacacggttcccggtgaaacc
cgcagccccttccaaaccagtggtattcgcctgggcacacctgcagtgaccagtcgtggc
atgaaggaagcagacatggagaagattgctgaagcaatcgacatcgtactcaatgcgcct
gaagatgagacggcgatcgcccaagcaagagcaattgcacttgaactctgcaaggcaaac
ccactgccctacgcaggctag
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