Coraliomargarita akajimensis: Caka_2426
Help
Entry
Caka_2426 CDS
T01204
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caa
Coraliomargarita akajimensis
Pathway
caa03030
DNA replication
caa03430
Mismatch repair
caa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Caka_2426
03430 Mismatch repair
Caka_2426
03440 Homologous recombination
Caka_2426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caa03032
]
Caka_2426
03400 DNA repair and recombination proteins [BR:
caa03400
]
Caka_2426
Enzymes [BR:
caa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Caka_2426
DNA replication proteins [BR:
caa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Caka_2426
DNA repair and recombination proteins [BR:
caa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Caka_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADE55442
UniProt:
D5ENG6
LinkDB
All DBs
Position
complement(2959034..2962765)
Genome browser
AA seq
1243 aa
AA seq
DB search
MPEKDREFVHLHVHTDHSLLDGCSRVDRLCSRAAELGMKALSITDHGVLYGLTSFFKQAE
KHGIKPLLGCEIYLVYEEKLAEVNELRAKQKSRHMGLLARNFTGYQNLCKIVSKAHTQGF
YRNPRTDLETLAAHSEGLIGFSGCLAAVIPQYLLEDKFEEAREAAAKFIDIFGKEFFIIE
LMDHGIPEQRKIIPGLLKIATEFDLKVVATNDVHYVNDADWQPHDSMLCIQTGAKVADEK
RMRYDAQQFYLKSREEMDLAFKEVPEAITNTSGIAEMCEVKLPFGVDHYPVYERPIEIDS
GSDHENFERVLDIYVEKKNEILVRDGKDPIELNAETRAKHKSNGLYLFELCKAGLNERYG
TNYDACRADWDNSSEADKRYCEQLEYELAIIAGTGFVDYFLIVWDFINWAREHDIPVGPG
RGSGAGCLVAYVLKITDIDPLSFGLLFERMLNLERVSPPDFDVDFCMRRRDLVVNYVRDK
YGKDRVANIITFGTFGAKMVVRDLARVNDIEFSEANKLAKMIPDELNISLDDSVKKSPEL
QQELKVNPVAQTIIEQGRVIEGMVRNTGKHACGVIIADQDITNLIPVTLQEGDLTTQYPK
GPSEDLGLLKMDFLGLKTLTVIDDAQTNVRNTRRMPDFDIEKVSLKDQPTYDLLNSGRTT
AVFQLESGGMQQLCRQIGLSSFEEIIALIALYRPGPMQFIPQFIEGKKDPSTVQIPHPLL
KDLVQETYGVLVYQEQVMQSAQIIAGYTLGGADILRRAMGKKIKEVMDAQKQVFIDGAKA
TNNIDRKTAESIFALLEKFAQYGFNKSHSAAYAMLSYRTAFLKANYPVEFMAAVLTSEQG
NADKLSNFLEECNAMNVPVLSPDVNASGATFTPIINGDESSIRFGMAAIKGVGEGAALVI
IEERDKDGPYESFTDFITRSSDKAVNRRVIEALIKTGAFDSLGHDRAHLLHDLDAELAEA
DSRRKDREAGQASLFDMLGNDAGIAEEDQTRKTPPKIPEMPMAEKLQHEKDLLGFYISGH
PMDAYAGLDMAIDSFQNADDLKRNFDDRQTYRLGGIVSNLQIKYTRKDSRQMAVFNVATR
TQNYELIMFPDPFEKNGARLENGKLALIHGITNRREGEMNLTAHEVFDLETSIPRIIERI
NFILHVNEQTAEFLDLLRETIDDEYNITKTGNLENGHTSEVAVSFLVDNQIVESNSSKAL
KIAINGSNYKALRKHPALAGLRIEAIPVNPIDDRKPWEKRRRR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaagaccgcgaattcgtccacctgcacgttcacactgaccacagcctgctc
gatggctgttcccgagtggaccgcttgtgttcccgcgctgcggaactcggcatgaaggcg
ctctcgatcaccgatcatggtgtgctctacggccttaccagcttcttcaaacaagctgag
aaacacggcatcaagccgctgctcggctgcgagatttaccttgtctatgaggagaaacta
gccgaggtcaacgagctgcgtgccaagcaaaaatcgcgacacatggggcttctggcgcgc
aacttcaccggctaccagaacctctgtaaaatcgtctcgaaggctcatacacagggcttc
taccggaatccacgcaccgacctcgaaacactcgcggcacacagtgagggcttaatcggc
ttctcaggttgcttggccgcagttattccgcaatatctgctcgaagacaaattcgaagaa
gcacgtgaagcagcggccaagtttatcgatatcttcggcaaggagtttttcatcatcgag
ttgatggaccacggcatccccgaacaacgtaaaatcataccgggcttgctgaaaatcgcc
accgagttcgacttgaaagtggtcgccaccaacgatgtccactatgtcaacgacgctgac
tggcaaccacacgactcgatgctttgcatccaaaccggagccaaggtcgccgacgagaag
cggatgcgctacgatgcgcaacaattttacctgaaatcgcgcgaggagatggatctggcc
ttcaaggaagtgccagaggcgatcaccaataccagtggcatcgccgagatgtgtgaggtc
aagctgcccttcggtgtcgaccactatccagtttacgaacgaccgatcgaaattgatagt
ggcagcgaccacgagaacttcgagcgcgtcctcgacatctacgtcgaaaagaaaaacgag
attctcgttcgtgacggcaaggacccgatcgagctcaacgcggaaacccgcgccaagcat
aagtcaaacggactctatctctttgaactgtgcaaggctgggctaaacgaacgctacggc
accaactatgacgcctgtcgtgccgactgggacaatagttccgaggcagacaagcgctac
tgtgaacagctggaatacgaactcgccatcatcgcgggtacgggcttcgtcgactatttc
ctcattgtttgggacttcattaattgggcccgagaacacgacattcccgtcgggccgggc
cgcggttccggcgcaggctgcctggtcgcgtatgtactcaagatcactgacatcgatcca
ctcagcttcggtctgctcttcgagcgaatgctgaatctcgagcgtgtgtcaccacccgat
ttcgatgtcgatttctgcatgcgtcgccgcgacctcgtcgtcaattatgttcgcgacaag
tatggaaaagaccgcgtagccaacatcatcactttcggtaccttcggcgcaaaaatggtc
gttcgcgacctcgctcgcgtcaatgacatcgagttttccgaagccaataaattggccaag
atgattcccgatgaactcaatatctcgttggatgattcggtcaagaaatcaccggaatta
cagcaggaactcaaagtcaaccctgtcgcacagacgatcattgagcagggacgcgtgatt
gaaggcatggtacggaatacaggtaaacacgcctgtggtgttattatcgccgaccaagat
atcactaatctaattcccgtaaccctacaggaaggcgacctcaccacacaataccccaag
ggcccatctgaagacctcggcttgctcaagatggacttccttgggctgaagacattgacc
gtcatcgacgatgcccagaccaatgtacgaaacacgcgcagaatgcctgatttcgacatc
gagaaggtatcactcaaagaccagccaacctatgatttgctcaacagtggacgaaccact
gcagtcttccagctggaatccggtggcatgcaacaactttgccgccagatcggcctaagc
tccttcgaagagatcatcgcgttgattgcgctctatcgaccgggccccatgcagttcatt
ccgcagtttatcgagggcaagaaggacccgtcgaccgtccagatccctcacccactactc
aaggacctagtgcaggagacctatggcgtgctggtctaccaagagcaggtgatgcagtcc
gctcagatcattgcaggctacacactgggaggcgccgatattctgcgtcgtgcgatgggc
aagaagatcaaggaggtcatggacgcgcagaagcaggtcttcatcgatggcgccaaagcg
accaacaatatcgaccgcaaaacagccgagtcgattttcgcccttctggagaaattcgca
cagtacggcttcaacaaatcgcactccgccgcttatgcgatgctgagttaccgaaccgcc
tttctcaaagcgaactacccagtcgagttcatggctgcagtcttgacctcggagcaaggc
aatgccgacaagctctcgaacttcctcgaagaatgcaacgcgatgaacgtcccggtcctc
agtccggacgtcaatgcatcgggtgccaccttcacaccaatcatcaacggcgacgaaagc
agcatacgctttggtatggccgcaatcaagggggtcggcgagggtgcagcgctcgtcatc
attgaagaacgcgacaaggatggcccctacgagagctttactgactttatcacgcgtagc
tcggacaaggcagtcaatcgacgggtcatcgaagcattgatcaagaccggggccttcgac
tcgctaggacatgaccgtgcccacctgcttcacgacctggatgctgagcttgccgaagcg
gacagtcgtcgcaaggaccgtgaagcgggccaagcctccttattcgacatgctcggcaac
gatgctggtattgcggaggaggaccaaactcgcaagacaccgcccaaaatcccggaaatg
ccaatggcggaaaagctgcagcacgaaaaagacctgcttggcttctacatttccgggcac
cccatggacgcatacgcgggcttggacatggcgatcgatagtttccaaaatgcggatgat
ttgaaacgcaacttcgatgaccgccaaacctatcgtctcggtggtatcgtcagtaacttg
cagatcaagtacacccgcaaagacagccgccagatggcagtcttcaacgtcgctacgcgc
actcaaaactacgagctcatcatgttcccagatcccttcgagaaaaacggagctcgcttg
gaaaacggaaagctcgcactcattcacggcattacgaatcgacgcgaaggtgagatgaat
cttaccgcacatgaggtcttcgacttggagacatccatcccacgcattattgagcggatc
aatttcatcctgcacgtcaacgagcagaccgccgagttccttgatctgcttcgagaaacc
atcgacgacgaatacaatattacgaaaaccgggaacctcgagaacggccacacatccgag
gttgccgtcagctttcttgtcgataatcaaatcgtcgaatccaattcctccaaggccctt
aagatcgccattaacggctcgaactataaagcgctacgcaagcaccctgccctcgcaggg
cttcggatcgaggcgattccggtcaatccaatcgatgaccgaaagccttgggaaaagcgg
cgacgcagataa
DBGET
integrated database retrieval system
