Coraliomargarita akajimensis: Caka_2482
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Entry
Caka_2482 CDS
T01204
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
caa
Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caa03009
]
Caka_2482
Enzymes [BR:
caa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Caka_2482
Ribosome biogenesis [BR:
caa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Caka_2482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
Methyltransf_25
Methyltransf_31
Methyltransf_11
PrmA
MTS
TPMT
Motif
Other DBs
NCBI-ProteinID:
ADE55498
UniProt:
D5ENM2
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All DBs
Position
3019925..3021154
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AA seq
409 aa
AA seq
DB search
MDKQVPKNFVAEPFEYHQELELTVDSLTNLGMGVCRDGNGWVVMVPFVIPGERVRVRVYR
NYSNYSDADLLEVLEPSADRVTPQCPLYQTCGGCQYQHVDYERQLAEKTGHVKELMEKIG
ELDHPIEGAIGSPEVYYYRSKITPHYQRQNKDGSQPIGFLQFGRRNQIVDVEQCPIATRE
INEALPEAREEARLSGGKKRRQRGGTLLLRHVLEGVVTDPKAVVSERVRDVTFQFKAGEF
FQNNPFILPKMVDYVEAEASADGARYLVDAYCGSGLFALSTAKSFEQVAGVEVSDQAVLW
AQANCRISGISNARFLIGKAEAIFNGLKFPADETALIIDPPRKGCDESFRLQLLQFRPQR
LVYVSCDPATQARDVKAFVDGGYRVTRIQPFDLFPHTRHIENVVSLSLA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcaagtgccaaaaaatttcgtcgcggagccttttgaatatcatcaggagtta
gagctgactgtcgacagccttaccaacttgggtatgggggtttgtcgcgatggcaatggc
tgggttgtcatggtgccctttgtgattccgggggagcgcgtgcgggtccgggtttatcgg
aattacagcaactactcggatgcggatctgctcgaggtgctggagccgtcagccgaccga
gtgacgccgcagtgtccgctttatcagacatgcggtggttgccagtatcagcatgtcgac
tatgagcgccagttggctgagaagactgggcatgtgaaggagttgatggagaaaattggc
gagttggatcatcccatcgaaggtgcgattggttcaccggaggtgtactattatcgttct
aaaatcacaccccattatcaacgacagaataaggatggtagtcagccgatcggttttctg
cagttcggccgccggaatcagattgtggatgtggaacagtgtccgattgcgaccagagag
attaatgaggcgctgcccgaggcgcgggaagaggcgcgtctgtcggggggtaaaaagcgc
cggcagcgtggtggtacgcttcttttgcgccatgtccttgagggcgtggttacggatccc
aaggcagtggtctcagagcgtgttcgcgatgtgacgtttcagttcaaagcgggagaattt
tttcagaacaacccctttattttgccaaagatggtcgactacgttgaggctgaagcctca
gctgacggtgcgcgctatctggtcgatgcctattgtggttcggggctctttgccctgtct
actgcgaagtcctttgagcaagtcgccggggttgaggtgagtgatcaggccgtgctctgg
gctcaggctaattgtcgtatcagtggtatcagcaacgcacgcttcttaatcgggaaggcg
gaagctatatttaacgggttgaagtttcctgcagatgaaaccgcgttgattatcgatccg
ccgcggaagggctgtgatgagagctttcgcctgcagttgctccaattccgcccgcagcga
ctggtctatgtttcctgtgatcccgcgactcaggctcgcgatgtgaaggcgtttgttgac
ggtggctatcgcgtgacgcgcatccagccctttgatttgtttccgcatacgcgtcatatc
gagaatgtggtgtcgttgagtctggcctaa
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