Chlamydia abortus S26/3: CAB085
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Entry
CAB085 CDS
T00242
Symbol
dnaF
Name
(GenBank) putative DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cab
Chlamydia abortus S26/3
Pathway
cab03030
DNA replication
cab03430
Mismatch repair
cab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAB085 (dnaF)
03430 Mismatch repair
CAB085 (dnaF)
03440 Homologous recombination
CAB085 (dnaF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cab03032
]
CAB085 (dnaF)
03400 DNA repair and recombination proteins [BR:
cab03400
]
CAB085 (dnaF)
Enzymes [BR:
cab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAB085 (dnaF)
DNA replication proteins [BR:
cab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAB085 (dnaF)
DNA repair and recombination proteins [BR:
cab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAB085 (dnaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
DNA_pol_A_exo1
CAF1
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CAH63542
UniProt:
Q5L728
LinkDB
All DBs
Position
100784..101533
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AA seq
249 aa
AA seq
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MTLLKDTVFVCLDCEMTGLDVKKDRIIEFAAIRFTFDSVIDSMETLINPDRVISAESQRI
HHISDAMLKDQPRIAEVFPKIKSFLKEGDYIVGHSVGFDLQVLSQEAERIGETFLSKYYI
IDTLRLAKEYGDSPNNSLEALAVHFNVPYDGNHRAMKDVEINISIFKHFCKRFRTIEQLK
QMLSKPIKMKYMPLGKHKGRCFSEIPLSYLQWASKMDFDPDLLFSIRHEIKHRQKGIGFT
QVNNPFIGL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgactttactaaaagatacagtttttgtttgcctagattgtgagatgactgggttggat
gtaaagaaagatcgtattattgaatttgctgcgatacgtttcacttttgatagcgtgatt
gattctatggagacattaatcaatcccgaccgtgtcatttccgccgaatcacagagaata
catcatatttccgacgcgatgttaaaagatcagcctaggattgcggaagtatttccaaag
attaaatcttttttgaaagaaggagactatatcgtaggccatagcgtaggattcgatctc
caggtattgagtcaagaagcagaaaggataggggagaccttcttatctaagtactacatc
atcgacaccttacgattggcgaaagaatacggagatagcccgaataattctttggaagcc
ctagctgtacacttcaatgttccctatgacggtaaccatcgcgctatgaaagatgttgag
atcaatatcagcattttcaaacatttctgtaagcgcttccggacgatagaacaactaaag
caaatgctatcaaaaccgataaagatgaaatatatgcctttaggaaaacataaaggacgt
tgtttctccgaaatccccctctcctatttgcagtgggcatctaaaatggatttcgatccc
gatttactcttttctataagacatgagatcaaacatagacaaaaaggcataggttttacg
caagtcaataacccatttattggcttgtaa
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