Chlamydia abortus S26/3: CAB129
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Entry
CAB129 CDS
T00242
Symbol
rho
Name
(GenBank) putative transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cab
Chlamydia abortus S26/3
Pathway
cab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAB129 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cab03021
]
CAB129 (rho)
03019 Messenger RNA biogenesis [BR:
cab03019
]
CAB129 (rho)
Transcription machinery [BR:
cab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CAB129 (rho)
Messenger RNA biogenesis [BR:
cab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CAB129 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
Mor
DUF5855
NACHT
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
CAH63587
UniProt:
Q5L6Y3
LinkDB
All DBs
Position
137441..138835
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEVLPKVKENRKHACPGLQEKSFAGECAVVADVVNENQPVTITKIAKLQRMGIE
ELNVLARQYGVKNIGSLTKSQVVFEIVKAKSERSDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKEHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgccaaaggtcaaagagaatagaaaacatgcg
tgtcctgggttgcaagagaagtcttttgcgggagaatgtgcagtagttgcggatgtagtt
aatgaaaatcaacctgtaactattacaaaaattgccaaattgcaaaggatgggaattgaa
gagcttaatgtattggctcgtcaatatggagtgaagaacatcgggtctctcactaaatct
caagtggtatttgagatcgttaaagcaaagtctgaacgttcagatgagcttttaatcgga
gagggagttttggaagttcttcctgatgggtttggctttttaagatcacctacctataac
tatctcccttctgctgaagatatttatgtttccccagctcaaatccgcagatttgattta
aagaagggagacacaattataggcacaatacgttctccaaaagagaaagaaaagtatttt
gctttattaaaggtagataagatcaatggatctactccagacaaagctaaggaacgagtc
ttattcgaaaacttgacccctctatacccaaatgaaagaattgttatggaaatggggaag
gagcacctcgctgagcgagtgttagatcttacggcacccatagggaaaggacaaagggga
cttattgtagcgcctccacgttctggaaagacagtaattttacagagcatagcgcacgct
attgcagtcaacaacccggatatcgttctcattgttttgttaattgacgagcgcccagaa
gaagtgaccgatatgattcgacaggtgcgcggtgaagttgtggcttctacgtttgatgag
cagcctgaaagacatattcaagttgcagaaatggttatagaaaaagctcgacgtttagtt
gaacacggaaaggatgtcgtgatccttcttgattctattacacgtttagcgcgagcttac
aataccgtgcaaccacattctggaaagattttaacaggcggcgtagacgcgagtgctcta
cataagcctaagagatttttcggagcagcaagaaatatcgaaggcggcggatcattaacc
atcttagctactgcgttgatagataccggttctagaatggatgaagtcatttttgaagag
ttcaaaggtacaggaaatatggaactggtattagaccgtcgtctttctgatcgaagaacc
tacccagcaattgatcttattaagagtgggacaagaaaagaagaattactttatcaccct
agtgaattggaaaaagtttaccttttccgacaggcaattgcagatcttactgcgattgac
gctatgcatctgctattaggtagattaaaaaagacaaatagtaacgcagaatttttactt
tctttaaaagaatag
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