Chlamydia abortus S26/3: CAB661
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Entry
CAB661 CDS
T00242
Symbol
rpoB
Name
(GenBank) putative DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cab
Chlamydia abortus S26/3
Pathway
cab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAB661 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cab03021
]
CAB661 (rpoB)
03400 DNA repair and recombination proteins [BR:
cab03400
]
CAB661 (rpoB)
Enzymes [BR:
cab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAB661 (rpoB)
Transcription machinery [BR:
cab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAB661 (rpoB)
DNA repair and recombination proteins [BR:
cab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAB661 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
CAH64108
UniProt:
Q5L5I3
LinkDB
All DBs
Position
complement(770396..774154)
Genome browser
AA seq
1252 aa
AA seq
DB search
MFKCPERVSVKKKEDILDLPNLIEIQIKSYKQFLQIGKLAEERDNIGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPDECIRRGITYSVTLKVRFRLTDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVVVSQVHRSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDL
IYIHIDRKKRRRKILAITFIRALGYSSDADIIEEFFQIEEHSLKSEKDFSFLVGKILADN
VLDEASSLVYGKAGEKLSTAMLKRMLDANISTLKIAVEADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDPKRYNLGRVGRYKLNRKLGFPMDEESLAQVT
LRKEDVIGALKYLIRLKMGDEKASIDDIDHLANRRVRSVGELIQNQCRSGLARMEKIIRE
RMNLFDFSSDTLIPGKIISAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVR
DGVVTDEIEYMTADVEEECVIAQASANLDEYNMFVDPVCWARYRGEAFEADTSTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLEARAAKDSGAI
VVAEEDGVVEYVDGYKVVIAAKHHPTLKRTYDLKKFLRSNSGTCINQRPLCSVGDVVVKG
DVIADGPATDKGELALGKNILVAFMPWYGYNFEDAIIISEKLIKQDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSEEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKG
YKNQISVLKIEYREKLGALLLNEKAPASIIHRRTADILVQEGTVFDQETIELLEQESLVD
LLMPPCDMYDVLKSLLSDYETSLQRLEVNYKTEVEHIREGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIHVKTPVFEGFPESRIWDMMIEQGLPADGKSYLYDGKTGERFDNTVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVTGRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatgcccggagcgggttagcgtcaaaaaaaaagaagatatcttagatcttcca
aatcttattgaaattcaaattaagtcatataagcaatttcttcagattggtaagcttgca
gaagagcgcgataatatcggcttagaagaggttttcagagagatttttccaattaaatct
tataatgaagctaccattttagagtatctatcttataacttaggtgtgccgaagtattct
cccgacgagtgtatccgtcgcggaatcacctatagtgttactttaaaagttcgcttccgt
ttgactgatgaaacaggaattaaggaagaagaagtctatatgggtactatacccattatg
acggataaaggaacctttattattaacggggctgaaagggttgttgtttctcaagtacac
cgttctcctgggattaatttcgaacaggaaaaacattctaagggaaacattttgttttct
ttcagaatcattccttatcgaggtagctggttagaggctatttttgatataaatgattta
atttatatccatattgatagaaagaaacgtcgccgtaagattttagctataacgtttatc
cgtgccctaggatattcatcagacgctgacattatcgaagaatttttccaaatagaagaa
cactctttaaaaagtgaaaaagatttttctttcttagtaggtaaaatcttagccgataat
gttttagatgaagcttcttctttagtttacggaaaggctggagaaaaacttagcacagct
atgttaaaacgtatgctcgatgctaatatctcaactttaaaaatagctgtagaggctgat
gaaaatcaccctatcatcaaaatgttggctaaagatccaacagactcttatgaagctgct
ttaaaggatttctatagaagattacgtcccggtgaacctgcgactttagcaaatgctcgc
tctacaattatgcgtctattctttgacccaaaacgttataacttgggaagagtaggtcgt
tataaattaaatagaaaacttggattccccatggatgaagagtccttggcacaagttact
ttaagaaaagaagatgtaattggtgctttgaagtatcttatccgcttaaaaatgggtgat
gaaaaagcttcgattgatgatatcgaccacttagctaaccgtcgtgtacgctctgtagga
gaacttatccaaaaccaatgccgctctggattggctagaatggaaaaaatcattcgagaa
agaatgaatttatttgatttctcttccgatacattgattccaggaaagattatctccgca
aaaggtcttgccagcgttttaaaagactttttcggtcgttctcagctttcccaattcatg
gatcaaaccaaccctgtggccgaattaacgcataaacgacgtttgtcagctttaggtcca
ggaggtttgaatagagaaagagctggatttgaagtccgcgacgtgcatgcgagccattac
ggacgtatatgcccaattgagactccagaaggaccaaatattggtttgattacttctcta
tcttcttttgcaaaaatcaacgaattcggattcattgaaactccttatcgcattgttaga
gatggagtggttaccgacgaaatcgaatacatgactgccgatgtcgaagaagaatgtgtg
attgctcaggcttcagcgaatttagatgaatacaatatgtttgtagatcctgtatgctgg
gcaagatatcgtggagaagcttttgaagcagacacaagtaccgtcacgcatatggacgtt
tctccaaagcaattggtatcgattgttacaggtttaattccatttttagaacatgacgac
gctaaccgtgctctcatgggatcaaacatgcaacgtcaagccgttcctttattgaaaact
gaagctcctattgtgggaacaggtttagaagcacgtgccgctaaagattcaggtgctatt
gttgtcgctgaagaagatggggtcgtggaatatgttgacggttataaagtagtcattgca
gctaaacatcacccaacacttaaacgcacttacgatcttaaaaagttcttaagatcaaac
tctggtacctgcattaatcaacggcctttatgtagtgtgggagatgttgtagtcaaaggt
gatgtcatagctgatggtcctgctacagataagggagaacttgctttaggaaagaacatc
ttagttgccttcatgccttggtatggatataacttcgaagatgcgattatcatttctgaa
aaattgattaagcaagatgcctacacctcaatttatattgaagagtttgaattaacagct
agagacacaaaattaggaaaagaagagattactcgtgatattcctaacgtttctgaagaa
gtcctcgctaacttaggtgaagacggaattattcgtattggtgctgaagtcaagcctggg
gatattcttgttggtaaaattaccccaaaatcagaaacagaattagctcctgaagaacgt
ttgttacgtgcaatctttggagagaaagctgctgatgttaaagacgcttctctgactgta
cctccaggaacagagggagttgtcatggatgtgaaagtcttcagtagaaaagataggctt
tctaaaagtgacgacgagcttgtagaagaagctgttcatttaaaagatctacagaaaggt
tataagaatcagatttcagtattaaaaatagagtatcgtgaaaaattaggagctctattg
ctcaatgaaaaagctccagcttcgattatacatcgtcgtaccgccgatattttggttcaa
gaaggtactgtgtttgatcaagagacaatagaactgctcgagcaagagtctttggtcgat
ctccttatgcctccctgcgatatgtatgatgttttaaaatctctactttctgattacgag
acatctttacaacgtttggaagtcaattataaaactgaagttgaacatattcgtgaaggc
gatgctgatcttgatcatggtgtgatccgccaagttaaggtatatgtcgcttcaaaacga
aaactgcaagttggagataaaatggcgggacgtcacggaaacaaaggagttgtttctaag
attgttcctgaagcagatatgccctaccttgctaacggtgaaactgtacagatgatcttg
aaccctctcggtgtgccttccaggatgaacttaggccaggtattggaaactcatcttggt
tacgctgcaaaaactgccggtattcatgtaaaaactccagtatttgaaggcttcccagag
tctcgtatctgggacatgatgatagaacaaggtttacccgcagatggtaagtcttacttg
tatgatggaaagaccggagagagattcgacaataccgtggtgatcggctacatttacatg
ttgaagctgagccacttaattgcagataaaattcacgctagatctatcggtccttattcc
ttggtcacccagcagcctctcggaggtaaagctcaaatgggaggtcaaagatttggagag
atggaagtttgggctttagaagcttatggagtagcgcatatgctccaagagattcttaca
gtgaaatcagacgacgttactggtcgaacaaggatttatgaatccattgttaaaggagaa
aacctcctgaagtcaggaacacctgagtcgtttaacgttttgatcaaggaaatgcaaggt
ctaggacttgatgttcgtcctatggtagtagatgcttaa
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integrated database retrieval system
