Chlamydia abortus S26/3: CAB730
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Entry
CAB730 CDS
T00242
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cab
Chlamydia abortus S26/3
Pathway
cab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAB730 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cab03019
]
CAB730 (pnpA)
03016 Transfer RNA biogenesis [BR:
cab03016
]
CAB730 (pnpA)
Enzymes [BR:
cab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CAB730 (pnpA)
Messenger RNA biogenesis [BR:
cab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CAB730 (pnpA)
Transfer RNA biogenesis [BR:
cab03016
]
Prokaryotic type
tRNA degradation factors
CAB730 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KfrA_N
KH-I_KHDC4-BBP
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CAH64177
UniProt:
Q5L5B4
LinkDB
All DBs
Position
840274..842358
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AA seq
694 aa
AA seq
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MTFETISVTLEEGKTLVFETGKIARQANGAVLARMQETWVFSSVCAANLEEAVDFLPLRV
DYQEKFSSIGKTLGGFIKREGRPTEREILTSRLIDRSMRPSLPNRLMQDIQILSYVWSYD
GVTLPDPIAICGVSAALAISDIPQTSIVAGVRVGFVNNRWVVNPTKAEMDVSRMELVLAG
TENAILMIEGHCDFFTEEQVIEAIEFGHKHIVTICKALKDWQKHIGKEKNTSGIVSLPEE
VQSAVNTFVEGKFVDLLKIKEKKAFEAASKQLENEVIEQLQEENEVFTAFNIKIAFKQAK
SNFIRGLIREQGLRSDGRSVTTIRPISIDTSFLPRTHGSCLFTRGETQTMAVCTLGSEAM
AQRYEDLNGEGLAKFYLQYFFPPFSVGEVGRIGSPGRREIGHGKLAEKALSHTLPDPMKF
PYTIRIESNITESNGSSSMASVCGGCLALMDAGVPIKTPIAGIAMGLILEDDHVTILSDI
SGLEDHLGDMDFKVAGNTEGITAFQMDIKVEGITPDIMRAALAQAKEGRQDILETMKQAL
AAPKTDLSQYAPRIETMQIKPNKIATVIGPGGKQIRQIIEEAGVQIDINDSGLVSISASS
PQAIEKAKSIIEGLVGEVEVGKIYEGRVTSVVPFGAFVEILPGKEGLCHISEFSKQRIDN
VGDFVKQGDTLTVKLLSINEKGQYKLSHKATLSE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaactatttctgttacccttgaagaaggcaaaacgttagtatttgaaacg
gggaaaatagcgcgtcaggctaacggcgcagttcttgctcgcatgcaagaaacatgggtc
ttttcttctgtttgtgcggctaaccttgaggaagctgttgacttcctacctctaagagtt
gactaccaagaaaagttttcctctataggaaaaactttaggcgggtttattaaaagggaa
ggtcgcccaacagaaagagaaattttaacttctcgcctgatagatcgctccatgcgtcct
tcgttacccaaccggttaatgcaggacattcaaattttatcttacgtatggtcatacgac
ggagtcactcttcctgatcccatcgcaatttgcggtgtttctgcagccttagcaatttct
gacattcctcagactagtattgtcgctggtgttcgtgtcggctttgtgaacaatcgttgg
gtagttaacccaacaaaagcggaaatggacgtttccagaatggaactcgttttagcagga
acagaaaatgctatcctaatgatcgagggacactgcgacttcttcacagaagagcaagtt
atcgaagctattgagtttggtcacaaacacattgttactatatgcaaggcactaaaggat
tggcaaaaacacataggtaaagaaaaaaatacaagtggaattgtttctcttccagaggaa
gtccaatctgccgtaaacacatttgtggaaggaaagtttgttgacctcctgaaaattaag
gaaaagaaagctttcgaggctgcttcaaaacagttagaaaatgaagtcatcgaacagctc
caagaagaaaatgaagtctttactgcgttcaatattaaaattgcttttaagcaagcaaag
tctaacttcatacgtggtttaatacgtgaacaaggtctacgttctgatggacgttctgta
acgactattcgtcctatctctattgatacgtctttcctccccaggactcacggcagttgc
ttatttactcggggagaaactcaaactatggctgtctgtacgttaggtagcgaagccatg
gcccaacggtatgaagacttaaatggtgaaggattagccaaattttacttacaatacttc
ttccctcccttttctgttggagaagtaggaaggatcggctctccaggaagaagagaaatc
ggtcacggtaaacttgcggaaaaagcattaagtcacacgctacccgatcctatgaagttc
ccctatactatccgcatagaatccaatattacagaatctaatggttcttcatctatggca
tctgtttgcggaggttgtttagctttaatggatgctggggtgcctattaaaactcctata
gctggtatagccatgggactaatattagaggatgaccatgtaactattctctcagatatt
tccggattagaagatcatttaggtgatatggatttcaaggttgctggaaataccgaagga
attacagcatttcaaatggatattaaagtagaaggcattactcctgatattatgcgagct
gccctagcccaagctaaagaaggtcgtcaagatattcttgaaaccatgaaacaagctctt
gcggctcctaaaaccgacttatcccaatacgctcctcgcattgaaacaatgcaaattaag
ccgaataaaattgctactgttattgggcccggaggtaaacagattcgtcaaattattgaa
gaagctggagtacaaattgatattaatgactcgggtcttgtcagtatttctgcctcttca
ccacaagccatagagaaagctaaatctattattgaaggcttagttggcgaagttgaagta
ggtaagatttatgaaggtcgcgtaacatctgttgtcccttttggagcctttgttgaaatt
ctccctggtaaagaaggtctttgccatatttctgaattttctaaacaacgtatagacaat
gttggtgatttcgttaaacagggggacaccctaactgttaaacttttaagcatcaacgaa
aaaggacagtacaaactcagtcataaagctactctcagtgagtag
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