Chlamydia abortus S26/3: CAB958
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Entry
CAB958 CDS
T00242
Symbol
topA
Name
(GenBank) DNA topoisomerase I-fused to SWI domain
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cab
Chlamydia abortus S26/3
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cab03032
]
CAB958 (topA)
03400 DNA repair and recombination proteins [BR:
cab03400
]
CAB958 (topA)
Enzymes [BR:
cab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CAB958 (topA)
DNA replication proteins [BR:
cab03032
]
Prokaryotic type
DNA Topoisomerases
CAB958 (topA)
DNA repair and recombination proteins [BR:
cab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAB958 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
SWIB
Toprim
Motif
Other DBs
NCBI-ProteinID:
CAH64396
UniProt:
Q5L4Q0
LinkDB
All DBs
Position
1118928..1121546
Genome browser
AA seq
872 aa
AA seq
DB search
MKKSLIVVESPAKIKTLQKLLGKGFIFASSLGHVVDLPAKEFGIDIEQDFEPDYQILPDK
QEVISQIRKLASSCDIVYLSPDPDREGEAIAWHIANQLPKHTRIQRISFNAITKGAVNEA
LKHPREIDMALVNAQQARRLLDRIVGYKISPILSRKLQQRSGISAGRVQSVALKLVVDRE
KAIEAFVPTEYWNIRVFLQDPKTSTTFWAHLYSAEGKKWEKELPKGKTEDEILLIQSEAQ
AQHYVALLEDAAYRVTRVEVKEKRRNAAPPFITSTLQQEASRHFRFSSSKTMSVAQTLYE
GVELDNEDATGLITYMRTDSVRIDPEALSNVRDYIHNTFGQEYLPKSPNVYTTKKMTQDA
HEAIRPTDIHLSPDKLEGKLSDDQLKLYSLIWKRFVASQMNPAIYDTLAMTISTNVKIDL
RASGSLLKFKGFLAVYEEKLDDDTTEEENLSLPQLHAQDVLDKEKVSAEQAFTKPLPRFT
EASLVKELEKSGIGRPSTYATIMNKIQSREYTIKENQRLRPTELGKIISQFLETNFPRIM
DIGFTALMEDELELIADNKKSWKLLLKEFWDQFLPVVTAAEKEAVIPRVLTDITCSACHK
GKLVKIWAKNRYFYGCSEYPECDFKTSEEELAFNKDDYAVDTPWNSPCPVCGGDMKVRHG
RFGTFLGCLNYPQCRGTISIHKKGEEVEKEETLPCPAVGCSGKILKKRSRYNKTFYSCSE
YPDCSVIGNTIDAVITKYTGTPKTPYEKKTTGKKKATTKSSSKTTKTTTKKKKSEGKTPK
TPKAGALLTPSPQLALMIGPEPLGRGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAII
GPEPVDMFQLPKLLNQHLFKSDVSPGSSSASS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccttaatcgtagtggaatctcccgctaaaattaaaaccttacaaaaactc
ttagggaaaggttttatttttgcttcatcactaggacatgttgttgaccttcccgcaaag
gaatttggtatcgatatcgaacaggatttcgaacctgactatcaaattcttcctgataaa
caagaagttatcagtcaaattcgtaaattagcctccagttgtgatattgtttatctctct
cctgaccccgatcgcgaaggagaagcgattgcctggcatattgccaatcagctgcctaaa
catacgcgtatccaaaggatatccttcaatgcgattaccaaaggtgctgtgaatgaggca
ttaaagcatcctcgagaaatcgatatggctttagtcaatgcgcaacaagcccgtcgcctg
ttagatcgtattgttggttacaaaatttctcctattttaagtcgtaagctacaacaaaga
tcgggcatatcggcaggacgcgtgcaatccgtagctctcaagctggtggttgatcgtgaa
aaagctatcgaagcctttgtacctactgaatattggaatattcgtgttttcctccaagat
cctaaaacatctacgacattctgggcccacctatattctgccgaagggaaaaagtgggaa
aaagaactccctaaggggaaaaccgaagatgaaattttattaattcaatccgaagctcaa
gcacaacattatgttgcgctgttagaagatgctgcctacagagtgactcgcgtagaagtg
aaagaaaaacgacgtaatgcagcgccgccatttattacatccaccttgcaacaagaagca
agtcgtcatttcagattttcttcttctaaaactatgtcagtggctcaaaccttatatgaa
ggtgttgagttagataacgaagatgccacaggattaattacttatatgcgtacagattct
gtacgtattgatcccgaggcattaagtaacgttagagattatatacacaacacatttgga
caagaataccttccgaagtctcctaatgtctacaccacgaaaaagatgactcaagatgct
cacgaagctattcgccctacagatatccatttatctcccgataagcttgaagggaaactc
tccgatgatcaactcaagctgtattctctgatttggaaacgttttgttgcttcccagatg
aatcctgcgatttacgatacgttagcgatgacgatttcaacgaatgtgaaaatagatttg
cgtgcttctggatcgttattgaaatttaaaggttttctcgcagtatacgaagaaaaactc
gatgatgatacaaccgaagaagaaaatctctcgcttcctcaactacacgctcaggacgtt
ttagataaggaaaaggtttcagcagagcaagcttttacaaaacctttgccaaggtttaca
gaagcgtctttagtaaaagagttagaaaaatcaggcattggtcgtccctcaacgtacgca
acgattatgaataaaattcaaagtcgtgagtatactattaaggaaaatcagcgcttacgc
cctacagaactcggaaaaattatctcgcaatttcttgagacaaactttcctcggattatg
gacataggttttacagctcttatggaagatgagctagaacttattgctgataataaaaag
tcttggaaattacttcttaaggaattttgggaccaatttcttcctgtagttactgctgca
gaaaaagaagctgtgatccctcgcgtgctcaccgatatcacatgttctgcatgtcataaa
ggaaaacttgtgaaaatctgggcaaaaaatcgttatttttacgggtgttccgaataccct
gagtgcgactttaaaacttctgaagaagaacttgctttcaataaagacgattatgctgtt
gatacaccttggaatagcccttgccctgtttgcggtggagatatgaaagtccgccacgga
cgttttggcacatttttaggatgcttaaactatcctcaatgtcgtggaacgatttccatt
cataagaaaggcgaggaagtagaaaaagaagaaacccttccctgtcctgctgtgggctgc
tcagggaaaattttaaagaaacgttcgcgttataataaaacattctattcttgctcagaa
tatcctgactgcagtgtgataggcaataccatagatgctgttattacaaagtacacagga
actccaaaaacgccgtacgaaaagaaaacaacagggaagaaaaaagctactacaaaatcc
agcagcaaaacgacgaaaacaacgactaaaaaaaagaaaagcgaaggaaagacgccaaaa
acccctaaagccggggcattacttacaccctcgcctcaattagcgctgatgattggccca
gaacctttaggacgtggagaagccacgaagaaagtctggcaatacatcaaggaccataat
ctacaatcccctgagaataaaaagatgttgctgcctgacgataagtttgcagcgattatt
ggcccagaacctgtggatatgttccaattgcccaaactattaaatcagcatttattcaaa
tcggatgtctccccaggctcatcatcagcttcttcataa
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