Caballeronia sp. SBC2: SBC2_00480
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Entry
SBC2_00480 CDS
T06459
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caba03009
]
SBC2_00480 (rsmB_1)
Enzymes [BR:
caba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SBC2_00480 (rsmB_1)
Ribosome biogenesis [BR:
caba03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SBC2_00480 (rsmB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
PCMT
FtsJ
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QIE22041
LinkDB
All DBs
Position
56096..57580
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AA seq
494 aa
AA seq
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MTEKPSRRRAVSSADSSRASSDARLATLHLAPDSLAFALDAAAQAVGAVRAGSALPAALQ
TVIEATHVAVSRGATQDIAYRTLRRLAVADALLAKLVRKAPPPHVSNVMACAFALLVDDE
AHAAYTPFTVVDQAVNAIAARREFAFAKGLVNAVLRSFLREREALLAEVQSNPVARFNYP
AWWIDAVKRGQPDEWENILDAGNRQGPLTLRVNARRMSVAQYLEVLKAEHIEADAVGIHA
VRLKTPMAVDKIPGFADGVVSVQDAGAQLAAQLLNARDGMRVLDACAAPGGKTGHVLELV
NVELIAVESDPGRARRIGENLQRLNVQAEIRVGDAGEPSGWSDGDPFDRILADVPCSASG
IVRRHPDIRWLRRPSDIAALVEEQRRILSALWPLVATGGELLYVTCSIFPEEGELQAQWF
GEVHEDAVRLDAPGQLLPTASRTGAAGSQVSPDPVTNSLTDNSGEAQRTRSTRTRDAEAF
ADHDGFFYARFQKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaagccttcccgacgccgcgccgtttcatcggcggatagcagccgagcgtcg
tccgacgcccgtctagcaacgcttcacctcgctcccgattcacttgcgttcgcgctcgat
gccgccgcgcaagcggtcggcgcggtgcgtgccggttctgcgttgcccgcagctttgcag
acggtcatcgaggcaacgcacgtggcggtatcgcgcggggcgacacaggacattgcgtac
cgcacgctgaggcgtcttgccgtggccgacgcgctgctcgcgaaactggtgcgcaaggcg
ccgccgcctcatgtgtcgaatgtgatggcctgcgcgttcgcgctgctcgtggacgatgaa
gcccacgccgcgtacacgcctttcaccgttgtcgatcaagcagtcaacgcgatagccgca
cggcgcgaattcgcgtttgcgaagggtctggtcaatgccgttttgcgctcgttcctgcgc
gaacgtgaagcgttgctcgccgaggttcaaagtaaccccgtcgcacgtttcaactatccc
gcatggtggatcgacgctgtaaaacgcggccagcccgacgaatgggaaaacatcctcgat
gccggtaaccggcaaggcccgctcacattgcgcgtgaatgcacggcgcatgagcgtggcg
caatatctcgaagtcctcaaggcagagcacatagaagccgatgccgtcggtattcacgcc
gtgcgcctcaagacgccgatggcggtcgacaagatccccggtttcgctgacggcgttgtg
tcggttcaggacgccggcgcgcagctcgccgcacagttgctgaacgcgcgcgacggcatg
cgcgtgctcgacgcatgcgccgcgcctggcggcaagactggccacgtgctggaactggtg
aacgtcgagttgatcgcggtggaaagcgatccggggcgcgcacggcgtatcggcgagaac
ctgcagcgcctgaatgtgcaggcggaaattcgcgtaggcgatgccggcgaaccgtcgggc
tggtcggacggtgatccgttcgatcgcattcttgccgacgtgccgtgttcggcatcgggg
atcgtgcggcgtcatcctgacattcgctggttgcgccgtccgtcagatatcgcagccttg
gtcgaagaacagcgccgcattctctccgcgctctggcccctggtcgcgaccggcggcgag
ttgctctacgttacgtgctcgatcttccccgaagagggcgagttgcaggcgcagtggttt
ggagaggtgcacgaagatgcggtacgattggacgcgccggggcaattattgccaacagcc
agccgcaccggcgcggctggttcgcaagtatcaccggacccggtcacgaactcgctgacg
gacaattcaggcgaggcgcaacgtacccgctcaacacggacgcgggacgcggaagccttt
gcggaccatgacggattcttctacgcgcgctttcagaaacggtga
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